Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H05
(874 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p pro... 32 1.2
AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA ... 32 1.2
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 31 1.6
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 31 1.6
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 31 1.6
BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p pro... 31 2.1
AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular prot... 31 2.1
AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA ... 31 2.1
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 6.3
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 6.3
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 6.3
>AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p
protein.
Length = 247
Score = 31.9 bits (69), Expect = 1.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 650 PSRNWSVTEPLNWHLRNI 703
P RNW + E LNWH R +
Sbjct: 109 PERNWVIVEGLNWHYRKV 126
>AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA
protein.
Length = 247
Score = 31.9 bits (69), Expect = 1.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 650 PSRNWSVTEPLNWHLRNI 703
P RNW + E LNWH R +
Sbjct: 109 PERNWVIVEGLNWHYRKV 126
>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
EG:95B7.8,FBgn0000928;fs(1)Yb protein.
Length = 1042
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 266 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 433
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 434 FETVYGAVELTHLTPPQS-PPGPATQL 511
F+ + + ++ ++ + PP P+ +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 266 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 433
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 434 FETVYGAVELTHLTPPQS-PPGPATQL 511
F+ + + ++ ++ + PP P+ +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 266 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 433
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 434 FETVYGAVELTHLTPPQS-PPGPATQL 511
F+ + + ++ ++ + PP P+ +
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSI 306
>BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p
protein.
Length = 856
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 302 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 481
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 482 QSPPGPAT 505
PPGP T
Sbjct: 189 APPPGPPT 196
>AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular
protein.
Length = 856
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 302 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 481
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 482 QSPPGPAT 505
PPGP T
Sbjct: 189 APPPGPPT 196
>AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA
protein.
Length = 856
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 302 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 481
++DL + EN P P PP+A ++ S P L F ++ V +T TP
Sbjct: 134 EIDLVYVVEN----PLPPSP-PPSADISVDELPGSSPQSFDLDPFAVLHEVVTMTPPTPI 188
Query: 482 QSPPGPAT 505
PPGP T
Sbjct: 189 APPPGPPT 196
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 302 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 457
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 302 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 457
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 302 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 457
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,151,582
Number of Sequences: 53049
Number of extensions: 628324
Number of successful extensions: 2074
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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