Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H04
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 33 0.075
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 29 0.70
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.7
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 27 3.7
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 27 4.9
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 8.6
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 8.6
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.6
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 26 8.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.6
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 32.7 bits (71), Expect = 0.075
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 13 QEMLINENSDFRDNSIPTDEASQDPLEVDTSKISENVANESSIAIRPEEFTPQPKKRGR 189
Q+ I+ NS D S T+ +D + K+ EN+ N SSI R + P K GR
Sbjct: 461 QKFPIDTNSSKCDMSASTEMHLKDTEKFANFKLKENILNHSSIYERDVSYLPALNKGGR 519
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 130 ESSIAIRPEEFTPQPKKRGRPR*IAYLGRSQTGYTPS 240
ES+ + P+ T P+KRGRPR A + + + PS
Sbjct: 471 ESNAEVSPDGMTLLPRKRGRPRKSANISVTSSPIRPS 507
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 359 EPSLAANPTHPTDNPTEEIDPTSSRVKLPRLTEAL 463
EP L PT+ DN T + D TS + ++P T+ +
Sbjct: 797 EPQLTFLPTYKFDNGTNDYD-TSDKQRVPSWTDRI 830
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 730 GPATTTVQLFEEETCMMDDNATPXKPSHLLDEDXQSS 840
GP + TV F+E + +++ ++T KP LD +S
Sbjct: 283 GPNSDTVSGFKETSSIVNSSSTTEKPGVALDSQNDTS 319
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 71 KHHRILSKSTLLRFQKTSQTRAALPSGLKNSRPNRRNEVDPXKLPTSE 214
K +L TL S +LP+ + +S+P R+E P P SE
Sbjct: 308 KTEELLELPTLSAVTSDSAQPHSLPASMPSSQPQSRSESLPLTHPNSE 355
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 266 VAVVLLTPSLGV*PVWLLPR*AIXRGRPRFFG--WGVNSSGLMAMLL 132
+A+V L SL W+LP + G PR+ WG ++ G+ L
Sbjct: 2234 IALVALLASLSRYHSWILPILGLGFGAPRWLQTLWGTSNIGIYVPFL 2280
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 461 LDRMPGGCVTPLSSR-RRGSVEPEPKV 538
L R P G +TPLSSR S+ P P V
Sbjct: 353 LQRTPSGSLTPLSSRPAHTSLPPIPTV 379
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 8.6
Identities = 33/118 (27%), Positives = 48/118 (40%)
Frame = +2
Query: 71 KHHRILSKSTLLRFQKTSQTRAALPSGLKNSRPNRRNEVDPXKLPTSEGAKPVTLPVTAL 250
+HH +L K + FQK + L L S P + N+ P K P+ P+T P
Sbjct: 13 RHHPVLPKGS---FQKKDDS-IVLEQEL--STPKQVNQARP-KFPS-----PIT-PTLPE 59
Query: 251 EERPQRSLRLTRERPSIVTKPXXXXXXXXXXXXAEAEPSLAANPTHPTDNPTEEIDPT 424
P + + PS+++ P +EA SLA N HP DN + T
Sbjct: 60 MHLPVGNSKFQAVLPSLIS-PTLPPGFGMASDDSEA--SLAENDLHPLDNDSTRTSKT 114
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 516 EPRRRLDNGVTHPPGMRSSASV 451
E RRR D+GV PGM A +
Sbjct: 405 ESRRRFDSGVDLEPGMEGGAGM 426
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 398 NPTEEIDPTSSRVKLPRLTEALDRMPGGCVTPLSSR 505
NPT+E TSS A+ R P G ++PLS R
Sbjct: 758 NPTKEFVSTSSYAPAANTRNAIIREP-GILSPLSPR 792
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,976,863
Number of Sequences: 5004
Number of extensions: 54046
Number of successful extensions: 172
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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