Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H02
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 146 1e-35
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 146 1e-35
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 122 3e-28
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 122 3e-28
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 122 4e-28
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 122 4e-28
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 119 3e-27
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 119 3e-27
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 119 3e-27
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 103 2e-22
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 95 6e-20
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 84 1e-16
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 32 0.45
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 32 0.45
U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical pr... 31 1.0
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 146 bits (355), Expect = 1e-35
Identities = 71/103 (68%), Positives = 83/103 (80%), Gaps = 4/103 (3%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKG----VACTQPRRVAAMSVAQRVAEEMDVALGQEV 533
G GKTTQIPQW+VEF G+ G VACTQPRRVAAMSVA RVAEEMDV LGQEV
Sbjct: 102 GSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEV 161
Query: 534 GYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
GYSIRFEDC +T+LKY TDGMLLREAM+ P+L++Y+V++L+
Sbjct: 162 GYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILD 204
Score = 85.4 bits (202), Expect = 5e-17
Identities = 35/55 (63%), Positives = 50/55 (90%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERTLATDILMG++KE+++ R+D+K+VIMSATL+AGK YF++ PL+++PG
Sbjct: 204 DEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPG 258
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 296 WEYKNDFMRLLNTHQCIVLVGETGSG 373
WEYK FM LL +QCI LVGETGSG
Sbjct: 79 WEYKEKFMELLRNNQCITLVGETGSG 104
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 146 bits (355), Expect = 1e-35
Identities = 71/103 (68%), Positives = 83/103 (80%), Gaps = 4/103 (3%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKG----VACTQPRRVAAMSVAQRVAEEMDVALGQEV 533
G GKTTQIPQW+VEF G+ G VACTQPRRVAAMSVA RVAEEMDV LGQEV
Sbjct: 102 GSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEV 161
Query: 534 GYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
GYSIRFEDC +T+LKY TDGMLLREAM+ P+L++Y+V++L+
Sbjct: 162 GYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILD 204
Score = 85.4 bits (202), Expect = 5e-17
Identities = 35/55 (63%), Positives = 50/55 (90%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERTLATDILMG++KE+++ R+D+K+VIMSATL+AGK YF++ PL+++PG
Sbjct: 204 DEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPG 258
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 296 WEYKNDFMRLLNTHQCIVLVGETGSG 373
WEYK FM LL +QCI LVGETGSG
Sbjct: 79 WEYKEKFMELLRNNQCITLVGETGSG 104
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 122 bits (294), Expect = 3e-28
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+ Q+++E +GLG+ + CTQPRRVAAMSVA+RVAEE LG +VGY+I
Sbjct: 566 GSGKTTQMTQYAIE----AGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTI 621
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ T++KYMTDGMLLRE + DP L Y +I+L+
Sbjct: 622 RFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLD 660
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERT+ TD+L G+LK ++R +LKL+I SATL++ K YF AP+ IPG
Sbjct: 660 DEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 122 bits (294), Expect = 3e-28
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+ Q+++E +GLG+ + CTQPRRVAAMSVA+RVAEE LG +VGY+I
Sbjct: 566 GSGKTTQMTQYAIE----AGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTI 621
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ T++KYMTDGMLLRE + DP L Y +I+L+
Sbjct: 622 RFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLD 660
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERT+ TD+L G+LK ++R +LKL+I SATL++ K YF AP+ IPG
Sbjct: 660 DEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 122 bits (293), Expect = 4e-28
Identities = 57/99 (57%), Positives = 76/99 (76%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+ Q+ +E G G + + CTQPRRVAAMSVA+RVA+EM V LGQ+VGY+I
Sbjct: 467 GSGKTTQLAQYLLE----DGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAI 522
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ +T++KYMTDG+LLRE + D L+QY I+++
Sbjct: 523 RFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMD 561
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYF-DNAPLMNIPG 825
+EAHER+L TD+L G+L+EVI +R+DLKL++ SAT++A K +F N P IPG
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPG 616
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 122 bits (293), Expect = 4e-28
Identities = 57/99 (57%), Positives = 76/99 (76%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+ Q+ +E G G + + CTQPRRVAAMSVA+RVA+EM V LGQ+VGY+I
Sbjct: 467 GSGKTTQLAQYLLE----DGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAI 522
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ +T++KYMTDG+LLRE + D L+QY I+++
Sbjct: 523 RFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMD 561
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYF-DNAPLMNIPG 825
+EAHER+L TD+L G+L+EVI +R+DLKL++ SAT++A K +F N P IPG
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPG 616
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 119 bits (286), Expect = 3e-27
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+PQ+ E G K + CTQPRRVAAMSVA RVA+E+ LG +VGYSI
Sbjct: 390 GSGKTTQLPQYLYEAGFCEG---GKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSI 446
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ +T+LKYMTDGMLLRE +++P L Y V++++
Sbjct: 447 RFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMID 485
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERTL TDIL G++K++ + R DLKL+I SATL+A K +FD+AP+ IPG
Sbjct: 485 DEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPG 539
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 296 WEYKNDFMRLLNTHQCIVLVGETGSG 373
+ +++ F+ + HQ +++ GETGSG
Sbjct: 367 YAFRDAFIEAVKEHQVLIIEGETGSG 392
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 119 bits (286), Expect = 3e-27
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+PQ+ E G K + CTQPRRVAAMSVA RVA+E+ LG +VGYSI
Sbjct: 390 GSGKTTQLPQYLYEAGFCEG---GKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSI 446
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ +T+LKYMTDGMLLRE +++P L Y V++++
Sbjct: 447 RFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMID 485
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERTL TDIL G++K++ + R DLKL+I SATL+A K +FD+AP+ IPG
Sbjct: 485 DEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPG 539
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 296 WEYKNDFMRLLNTHQCIVLVGETGSG 373
+ +++ F+ + HQ +++ GETGSG
Sbjct: 367 YAFRDAFIEAVKEHQVLIIEGETGSG 392
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 119 bits (286), Expect = 3e-27
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+PQ+ E G K + CTQPRRVAAMSVA RVA+E+ LG +VGYSI
Sbjct: 390 GSGKTTQLPQYLYEAGFCEG---GKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSI 446
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFEDC+ +T+LKYMTDGMLLRE +++P L Y V++++
Sbjct: 447 RFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMID 485
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHERTL TDIL G++K++ + R DLKL+I SATL+A K +FD+AP+ IPG
Sbjct: 485 DEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPG 539
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 296 WEYKNDFMRLLNTHQCIVLVGETGSG 373
+ +++ F+ + HQ +++ GETGSG
Sbjct: 367 YAFRDAFIEAVKEHQVLIIEGETGSG 392
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 103 bits (246), Expect = 2e-22
Identities = 48/108 (44%), Positives = 74/108 (68%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GK+TQ+PQ+ +E + + TQPRRVA +++A RVAEE D LG +VGY++
Sbjct: 103 GCGKSTQVPQFLLE---AGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTV 159
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE*SPRKDTCN 689
RF+D S T +K+MTDG+LLRE ++DP+L +Y +I+++ + +CN
Sbjct: 160 RFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMID-EAHERSCN 206
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/46 (45%), Positives = 37/46 (80%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFD 798
+EAHER+ TDIL+G+L+++I+ R+DL++++ SATL+A +F+
Sbjct: 198 DEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFE 243
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 95.1 bits (226), Expect = 6e-20
Identities = 44/99 (44%), Positives = 70/99 (70%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GK+TQ+PQ V +G+ + +A TQPRRVAA+S+A RVA EM +G VGY +
Sbjct: 187 GSGKSTQVPQLCVR----AGIANSGSIAVTQPRRVAAISLASRVATEMGTNIGGIVGYHV 242
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFE+ + +T ++YMTDG++LR+A+ P+L++Y ++++
Sbjct: 243 RFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVIID 281
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSD----LKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+EAHER+L +D+LM +L++ QR + L+L+IMSATL A K YF+NA ++ + G
Sbjct: 281 DEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAG 339
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/99 (44%), Positives = 65/99 (65%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GK+TQ+PQ+ ++ +G GVACTQPRR+A ++A+RVA E G EV + I
Sbjct: 118 GCGKSTQVPQYLLK----AGF---TGVACTQPRRIACTALARRVAYETLNQYGSEVAFQI 170
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
RFE +T L ++T+G+LLR+ D +LE+Y VI+L+
Sbjct: 171 RFETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILD 209
Score = 62.9 bits (146), Expect = 3e-10
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAPLMNIPG 825
+E HER L +D+L+G+L+++ +R DLKL++MSAT+N YF+ AP++ +PG
Sbjct: 209 DEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQVPG 263
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 82.6 bits (195), Expect = 3e-16
Identities = 49/110 (44%), Positives = 70/110 (63%)
Frame = +3
Query: 333 LINV*CS*EKQGQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMD 512
L+ V C + G GKTTQIPQ+ E A + G+ G+ T+PRRVAA+++AQRV E+
Sbjct: 253 LVTVVCG--ETGSGKTTQIPQFLYE-AGYASEGELIGI--TEPRRVAAIAMAQRVGVEL- 306
Query: 513 VALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
A EV Y IR+E T + +MTDG+L++E D ML++Y VIL++
Sbjct: 307 -AKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILID 355
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRS----DLKLVIMSATLNAGKXXH 789
+EAHER++ +D+L+G+L ++ RS L+LVIMSATL H
Sbjct: 355 DEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTH 401
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 77.0 bits (181), Expect = 2e-14
Identities = 41/99 (41%), Positives = 60/99 (60%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GKTTQ+PQ+ ++ A + K V TQPRR+AA+S+A+RVA E +G+ VGY +
Sbjct: 207 GCGKTTQVPQFILDEAHENN--KHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQV 264
Query: 546 RFEDCSGPQTLLKYMTDGMLLREAMSDPMLEQYRVILLE 662
R + T+L Y T G+LLR SDP+ I+++
Sbjct: 265 RLDSRRSDDTVLTYCTTGVLLRMLTSDPVASGITHIVMD 303
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATL--NAGKXXHYFDN 801
+E HER + TD L+ L+E +K R DLK+++MSAT+ N +YF+N
Sbjct: 303 DEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFEN 351
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 366 GQGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSI 545
G GK+TQ+ Q+ +E + G + +QPRR++A+S+A+RVA E +G+ GY++
Sbjct: 407 GCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNV 466
Query: 546 RFEDCS-GPQTLLKYMTDGMLLR 611
RF+ + P + + T G+LLR
Sbjct: 467 RFDSATPRPYGSIMFCTVGVLLR 489
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = +1
Query: 661 NEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLNAGKXXHYFDNAP 807
+E HER + TD ++ VL+E+I DL++V+MSAT++ ++F + P
Sbjct: 504 DEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIP 552
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 477 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 599
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 477 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 599
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 477 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 599
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical
protein C23F12.3 protein.
Length = 143
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 570 VALNSLQNECCNQLPDPKPHP-FLRLPSEQQT*QPLVL 460
+A N+ Q C NQLP P P P F+++ +QQ + L L
Sbjct: 24 MAENNRQTRCANQLPPPAPVPDFIKVWVKQQKEKELAL 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,842,014
Number of Sequences: 27780
Number of extensions: 361305
Number of successful extensions: 826
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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