Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_H01
         (816 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069495-1|AAL39640.1|  923|Drosophila melanogaster LD22235p pro...    32   1.1  
AY058705-1|AAL13934.1|  463|Drosophila melanogaster LD42783p pro...    32   1.1  
AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein...    32   1.1  
AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB...    32   1.1  
AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA...    32   1.1  
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    32   1.1  
BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p pro...    31   2.5  
AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p pro...    31   2.5  
AL031884-2|CAB40750.1|  704|Drosophila melanogaster EG:23E12.5 p...    31   2.5  
AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA...    31   2.5  

>AY069495-1|AAL39640.1|  923|Drosophila melanogaster LD22235p
           protein.
          Length = 923

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 408 VPPEILLSAFLFSRKFLNTFVMVLFNLC-LPVFFRKVFWTLDSL-LISILESFSDVFD 241
           + PEIL+  +  + +F++  +M L N C + +F RKV++  D L   ++ +S  ++FD
Sbjct: 468 INPEILIGCYHSNPEFVHK-IMKLLNYCNIDIFTRKVYFERDLLTTANVRDSLVELFD 524


>AY058705-1|AAL13934.1|  463|Drosophila melanogaster LD42783p
           protein.
          Length = 463

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 408 VPPEILLSAFLFSRKFLNTFVMVLFNLC-LPVFFRKVFWTLDSL-LISILESFSDVFD 241
           + PEIL+  +  + +F++  +M L N C + +F RKV++  D L   ++ +S  ++FD
Sbjct: 8   INPEILIGCYHSNPEFVHK-IMKLLNYCNIDIFTRKVYFERDLLTTANVRDSLVELFD 64


>AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein
           protein.
          Length = 1177

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 408 VPPEILLSAFLFSRKFLNTFVMVLFNLC-LPVFFRKVFWTLDSL-LISILESFSDVFD 241
           + PEIL+  +  + +F++  +M L N C + +F RKV++  D L   ++ +S  ++FD
Sbjct: 722 INPEILIGCYHSNPEFVHK-IMKLLNYCNIDIFTRKVYFERDLLTTANVRDSLVELFD 778


>AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB,
           isoform B protein.
          Length = 1177

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 408 VPPEILLSAFLFSRKFLNTFVMVLFNLC-LPVFFRKVFWTLDSL-LISILESFSDVFD 241
           + PEIL+  +  + +F++  +M L N C + +F RKV++  D L   ++ +S  ++FD
Sbjct: 722 INPEILIGCYHSNPEFVHK-IMKLLNYCNIDIFTRKVYFERDLLTTANVRDSLVELFD 778


>AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA,
           isoform A protein.
          Length = 1177

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 408 VPPEILLSAFLFSRKFLNTFVMVLFNLC-LPVFFRKVFWTLDSL-LISILESFSDVFD 241
           + PEIL+  +  + +F++  +M L N C + +F RKV++  D L   ++ +S  ++FD
Sbjct: 722 INPEILIGCYHSNPEFVHK-IMKLLNYCNIDIFTRKVYFERDLLTTANVRDSLVELFD 778


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
            protein.
          Length = 1998

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
 Frame = +2

Query: 317  TGRQRLNRTITKVFKNLRENKKALSKISGGTISS--NDSKCTTVINNKIQQKTDSDEMLV 490
            T     N T + +  +   N  A S I    IS+  N S C T I++    +   D+M V
Sbjct: 756  TSSNNNNTTTSSISSSDNNNLPATSNIEPCAISNQTNSSGCGTDISDTTSDELAGDDMDV 815

Query: 491  I--SDDEDCSIIAFSPNQSKQCSTPKPKSLTG 580
                 D D  ++  S ++  +C   +  SLTG
Sbjct: 816  RRRDRDRDRDLLGASDSELSRCYVSETSSLTG 847


>BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p
           protein.
          Length = 1403

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = +2

Query: 233 KQKSKTSLKDSKMEIRRLSN-VQKTFLKKTGRQRLNRTITKVFKNLRENKKALSKISGGT 409
           +Q  + SL+  K+ I  LS  +++  L     +RL   + +   +  + K      SG  
Sbjct: 25  EQDVRASLERHKVRINELSKELEQETLYVEYLERLLSDVERYRVSGGDPKALFEAASGSC 84

Query: 410 ISSNDSKCTTVINNKIQQKTDSD 478
            SSN+S C++  N   Q++++++
Sbjct: 85  ASSNNSNCSSTTNGATQEESNTN 107


>AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p
           protein.
          Length = 995

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 23/104 (22%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
 Frame = +2

Query: 218 STKMNKQKSKTSLKDSKMEIRRLSNVQKTFLKKTGRQRLNRT----ITKVFKNLRENKKA 385
           S+ +  +KS  + K +K+ I ++ ++ +   KKT  +  N+T    ++K  K +  NK +
Sbjct: 113 SSNVAAKKSAATSKSAKLPIPKVHSINELAPKKTKVKTPNKTKEASLSKKHK-VNGNKSS 171

Query: 386 LSKISGG---TISSNDSKCTTVINNKIQQKTDSDEMLVISDDED 508
           +  +  G    I    ++ + +  N +   ++ D+ L+ SD E+
Sbjct: 172 MKVVQNGKVVEIIGTAAETSDIEMNSLDDWSEEDDYLIESDSEN 215


>AL031884-2|CAB40750.1|  704|Drosophila melanogaster EG:23E12.5
           protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = +2

Query: 233 KQKSKTSLKDSKMEIRRLSN-VQKTFLKKTGRQRLNRTITKVFKNLRENKKALSKISGGT 409
           +Q  + SL+  K+ I  LS  +++  L     +RL   + +   +  + K      SG  
Sbjct: 25  EQDVRASLERHKVRINELSKELEQETLYVEYLERLLSDVERYRVSGGDPKALFEAASGSC 84

Query: 410 ISSNDSKCTTVINNKIQQKTDSD 478
            SSN+S C++  N   Q++++++
Sbjct: 85  ASSNNSNCSSTTNGATQEESNTN 107


>AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA
           protein.
          Length = 995

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 23/104 (22%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
 Frame = +2

Query: 218 STKMNKQKSKTSLKDSKMEIRRLSNVQKTFLKKTGRQRLNRT----ITKVFKNLRENKKA 385
           S+ +  +KS  + K +K+ I ++ ++ +   KKT  +  N+T    ++K  K +  NK +
Sbjct: 113 SSNVAAKKSAATSKSAKLPIPKVHSINELAPKKTKVKTPNKTKEASLSKKHK-VNGNKSS 171

Query: 386 LSKISGG---TISSNDSKCTTVINNKIQQKTDSDEMLVISDDED 508
           +  +  G    I    ++ + +  N +   ++ D+ L+ SD E+
Sbjct: 172 MKVVQNGKVVEIIGTAAETSDIEMNSLDDWSEEDDYLIESDSEN 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,578,716
Number of Sequences: 53049
Number of extensions: 638640
Number of successful extensions: 2152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)