Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_H01
         (816 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    25   0.63 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   7.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   7.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   7.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.8  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 339 EPSQKYLKIYVRIKKH*VKFQEAQ 410
           E  +K  + Y+RIKKH VKF  A+
Sbjct: 164 EKYEKNGETYLRIKKHAVKFNPAK 187


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 557 PKPKSLTGMDMNHNHLTTMRKAH 625
           PK K   G    HN L   R+AH
Sbjct: 41  PKTKKSQGSRTTHNELEKNRRAH 63


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 332 LNRTITKVFKNLRENKKALSKISGGTISSNDSKCTTV 442
           L ++     K ++EN   L+ +SGG++     +  TV
Sbjct: 419 LEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTV 455


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 332 LNRTITKVFKNLRENKKALSKISGGTISSNDSKCTTV 442
           L ++     K ++EN   L+ +SGG++     +  TV
Sbjct: 419 LEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTV 455


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 332 LNRTITKVFKNLRENKKALSKISGGTISSNDSKCTTV 442
           L ++     K ++EN   L+ +SGG++     +  TV
Sbjct: 419 LEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTV 455


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 632 KSCVPFALLSSDYGSCPYQSNSLALESNT 546
           K C  F   S DY +C  Q N+ A    T
Sbjct: 518 KQCDEFVEDSDDYWNCVIQYNTRAENHQT 546


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,386
Number of Sequences: 438
Number of extensions: 4415
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)