Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G24
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.023
SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.023
SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr ... 34 0.023
SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr 1... 34 0.023
SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr 1|||... 29 0.67
SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr 2|... 29 0.67
SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyce... 29 0.88
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 29 1.2
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 3.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.6
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 27 3.6
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 27 3.6
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 27 4.7
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 26 6.2
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 26 6.2
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 26 6.2
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 26 6.2
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 26 8.2
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 8.2
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 8.2
>SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 34.3 bits (75), Expect = 0.023
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 275 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSE-VVIKQMKNVNKARTNMKFMCMDAT 451
K +++L GC + + L +GY + +D+SE + K + + ++N+ F D +
Sbjct: 8 KLHENVLDAGCEPNRNARYLASLGY-KVVGIDISERAISKAIDKTSSEKSNVNFNQRDFS 66
Query: 452 RMSFEDEAFNVVLDKGTLDALM 517
R++ F+ V+D G +++
Sbjct: 67 RLNEFKGHFDTVIDIGCFHSIL 88
>SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 34.3 bits (75), Expect = 0.023
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 275 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSE-VVIKQMKNVNKARTNMKFMCMDAT 451
K +++L GC + + L +GY + +D+SE + K + + ++N+ F D +
Sbjct: 8 KLHENVLDAGCEPNRNARYLASLGY-KVVGIDISERAISKAIDKTSSEKSNVNFNQRDFS 66
Query: 452 RMSFEDEAFNVVLDKGTLDALM 517
R++ F+ V+D G +++
Sbjct: 67 RLNEFKGHFDTVIDIGCFHSIL 88
>SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 238
Score = 34.3 bits (75), Expect = 0.023
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +2
Query: 356 ITNVDVSEVVIKQMKNVNKART---NMKFMCMDATRMS-FEDEAFNVVLDKGTLDAL-MP 520
+ VD SE I KN+ + R +KF +D + S F + ++++LDKGT DA+ +
Sbjct: 96 LVGVDYSEAAIVLAKNIARHRQFSDKVKFQQLDIIKDSKFCSKDWDLILDKGTFDAISLS 155
Query: 521 DATEETNAIIDKYFSEIKRVLKLGGRFVCIS 613
+ + Y ++ +L G F+ S
Sbjct: 156 GELLDGRPLNSVYVDRVRGMLSPNGIFLITS 186
>SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 34.3 bits (75), Expect = 0.023
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 275 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSE-VVIKQMKNVNKARTNMKFMCMDAT 451
K +++L GC + + L +GY + +D+SE + K + + ++N+ F D +
Sbjct: 8 KLHENVLDAGCEPNRNARYLASLGY-KVVGIDISERAISKAIDKTSSEKSNVNFNQRDFS 66
Query: 452 RMSFEDEAFNVVLDKGTLDALM 517
R++ F+ V+D G +++
Sbjct: 67 RLNEFKGHFDTVIDIGCFHSIL 88
>SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 356
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 ITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKAR-TNM 427
I GC NSSL Y G V I + + IK + N+N + TNM
Sbjct: 47 IAGCANSSLEIVNYIPGSVGIEKLIEAVPAIKAIANINGVQVTNM 91
>SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 ITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKAR-TNM 427
I GC NSSL Y G V I + + IK + N+N + TNM
Sbjct: 47 IAGCANSSLEIVNYIPGSVGIEKLIEAVPAIKAIANINGVQVTNM 91
>SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 29.1 bits (62), Expect = 0.88
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +2
Query: 266 KYIKTKDSILITGCGNSSLSADL--Y----DVGYVNITN--VDVSEVVIKQMKNVNKAR- 418
KY+K D IL GCG +++ Y +V V + +D +E +++ + + K +
Sbjct: 36 KYVKKTDRILDVGCGPGTITVGFPKYVPEGEVIGVEPSQELLDKAEEALRKEETLKKEKI 95
Query: 419 TNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGR 598
N F ++ F D F++V L L + A++ E+KRV K GG
Sbjct: 96 NNCSFRLGSIYKLPFPDNTFDIVNTHQVLVHLQ----DPVAALV-----ELKRVTKPGG- 145
Query: 599 FVC 607
+VC
Sbjct: 146 YVC 148
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 263 NKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIK--QMKNVNK 412
N ++ +L GCG LS G ++ VD+SE++ K Q+ VNK
Sbjct: 49 NPHLFRDKIVLDVGCGTGILSMFCARAGAKHVYGVDMSEIIHKAVQIVEVNK 100
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 263 NKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKN 403
NK+I ++L GCG LS G + VD S+++ + N
Sbjct: 250 NKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQMAISN 296
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 338 DVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALM 517
+V +N+ ++S V K + ++N+ +D T S + F K + D
Sbjct: 1055 EVASMNVRLEELSTRVSKMLSDINE---------VDHTIASLSLKLFQAEDTKNSYDQTS 1105
Query: 518 PDATEETNAIIDKYFSEIKR 577
P+AT+E N I +E+++
Sbjct: 1106 PEATQERNRTISSKLAEMEK 1125
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 302 GCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNK 412
G SSLS + G+ I + VSE VI KNVNK
Sbjct: 2 GSDGSSLSPKVSQPGHTEIVD-HVSEKVITNGKNVNK 37
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/105 (16%), Positives = 39/105 (37%)
Frame = +2
Query: 461 FEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGRFVCISLLQSHILAK 640
F ++FN ++ + P + I YF VL +G + + K
Sbjct: 313 FRTQSFNDSMEHW-VPVCFPTLNPDAYIYIYSYFLCKDTVLIMGSSESGVFFEMQSVKCK 371
Query: 641 LMEGFCEKSWMXRVVRCHEAEXXNAENSDGPXLRVXVVXAXKFXE 775
+ + + W+ +++ C E + N P + + + K+ +
Sbjct: 372 VAQEIQDHGWLKKLIYCEEMDRTTPRNPGSPCISHYLFYSKKYSQ 416
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 236 EYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVG 346
E+ ELC + +KY T ++ I N++L ++++ G
Sbjct: 500 EFYELCKKWDKYDDTLMNVFIKNTKNTALPDEVFEPG 536
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 428 SYWFWLCLRFS 396
SYW W CL FS
Sbjct: 112 SYWIWTCLHFS 122
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 428 SYWFWLCLRFS 396
SYW W CL FS
Sbjct: 112 SYWIWTCLHFS 122
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 428 SYWFWLCLRFS 396
SYW W CL FS
Sbjct: 84 SYWIWTCLHFS 94
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 428 SYWFWLCLRFS 396
SYW W CL FS
Sbjct: 112 SYWIWTCLHFS 122
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 519 GIRASRVPLSNTTLNASS 466
G+ A+++PLSNTT+ S+
Sbjct: 1513 GVAANKLPLSNTTIEGSA 1530
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +1
Query: 316 KFERGPIRCWIC--KYNKCGC 372
K+E+ RCWIC +Y+K C
Sbjct: 6 KYEKSSARCWICYEEYDKKLC 26
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 477 NASSSKDILVASMHINFILVLALFTFFICL 388
++SSS V+S+ NF + A F+CL
Sbjct: 4 SSSSSTSAFVSSLVFNFAIFCAFIGLFLCL 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,987,929
Number of Sequences: 5004
Number of extensions: 56079
Number of successful extensions: 182
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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