Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G24
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0669 + 18531419-18531820,18532589-18532690,18532882-185329... 117 1e-26
08_02_1260 - 25680618-25680677,25680763-25680893,25681085-256811... 92 5e-19
05_04_0192 + 18936955-18937168,18937385-18937498,18937588-189376... 91 8e-19
11_06_0082 + 19891184-19891332,19891349-19891445,19891584-198917... 69 4e-12
01_06_0299 + 28305447-28305729,28305892-28306104,28306915-283070... 47 2e-05
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 42 9e-04
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 38 0.008
01_06_0361 + 28733493-28733523,28733743-28733870,28733982-287340... 37 0.019
07_03_1543 + 27582033-27582387,27583638-27583706,27583790-275838... 36 0.033
01_07_0375 - 43152161-43152262,43152556-43152664,43153433-431535... 33 0.23
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 31 1.2
02_01_0042 + 295608-296222,298479-298925 29 3.8
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477... 28 8.7
>04_03_0669 +
18531419-18531820,18532589-18532690,18532882-18532948,
18533530-18533708,18533792-18534052,18535324-18535407,
18535517-18535564,18535654-18535718,18536849-18536897,
18538132-18538372,18539623-18539744,18539942-18540022,
18540094-18540168,18540408-18540550,18540662-18540812,
18540915-18541097
Length = 750
Score = 117 bits (282), Expect = 1e-26
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 11/157 (7%)
Frame = +2
Query: 218 AFEWYGEYLELCGQLNKYIK---------TKDSILITGCGNSSLSADLYDVGYVNITNVD 370
+FEWY E+ +L L + IL+ GCG+S LS LYD G+ +TNVD
Sbjct: 44 SFEWYAEWDDLRAPLLSLLHGGGGAEGGGKAPEILVPGCGSSVLSERLYDAGFRRVTNVD 103
Query: 371 VSEVVIKQM-KNVNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALM-PDATEETNA 544
S V++ M + +AR M++ MD T M F D +F+V+LDKG LDALM P+A +
Sbjct: 104 FSRVLVADMLRRHARARPEMRWRVMDMTDMQFTDGSFDVILDKGGLDALMEPEAGTKLGM 163
Query: 545 IIDKYFSEIKRVLKLGGRFVCISLLQSHILAKLMEGF 655
KY +E KRVLK GG+F C++L +SH+LA L+ F
Sbjct: 164 ---KYLNEAKRVLKSGGKFACLTLAESHVLALLLSEF 197
>08_02_1260 -
25680618-25680677,25680763-25680893,25681085-25681163,
25681250-25681280,25681358-25681410,25681441-25681511,
25681610-25681678,25681776-25681889,25683101-25683293
Length = 266
Score = 92.3 bits (219), Expect = 5e-19
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Frame = +2
Query: 221 FEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMK 400
F+WY +Y L L Y++ +L+ GCGNS ++ D GY +I N+D+S VVI QMK
Sbjct: 33 FDWYQKYPALAPLLAVYVRRHHRLLLAGCGNSVFGENMVDDGYQDIVNIDISSVVIDQMK 92
Query: 401 NVNKARTNMKFMCMDATRMS-FEDEAFNVVLDKGTLDALM 517
+ + ++K+M MD M+ FE +F+ V+DKGTLD++M
Sbjct: 93 KKYRDKPHLKYMKMDVRNMAEFESGSFDAVIDKGTLDSIM 132
>05_04_0192 +
18936955-18937168,18937385-18937498,18937588-18937656,
18937807-18937826,18937932-18937984,18938082-18938139,
18938338-18938367,18938468-18938719
Length = 269
Score = 91.5 bits (217), Expect = 8e-19
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 209 GNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVI 388
G F+WY Y L L + +L+ GCGNS LS D+ GY + NVD+S VVI
Sbjct: 36 GGAFFDWYQAYPALRPLLRARLPASSRVLMLGCGNSLLSEDMVKDGYEEVVNVDISSVVI 95
Query: 389 KQMKNVNKARTNMKFMCMDATRMS-FEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFS 565
+QM+ + + + MD MS F D F+ VLDKGTLDA+M ++ K +
Sbjct: 96 EQMREKHVDIPQLTYFQMDVRDMSLFGDGTFDCVLDKGTLDAMM--CGDDAPLGASKMLA 153
Query: 566 EIKRVLKLGGRFVCI 610
E+ R+L+ GG ++ +
Sbjct: 154 EVARILRPGGIYMLV 168
>11_06_0082 +
19891184-19891332,19891349-19891445,19891584-19891725,
19891853-19891935,19892356-19892490,19892759-19892863,
19893043-19893168
Length = 278
Score = 69.3 bits (162), Expect = 4e-12
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Frame = +2
Query: 221 FEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVN-ITNVDVSEVVIKQM 397
+EW+ ++ L + S+L GCGNS L +L G IT VD+S V +++M
Sbjct: 60 YEWFKDFSHFRHLLAPLLSPSISVLEVGCGNSRLGEELLREGVAGGITCVDLSPVAVQRM 119
Query: 398 KN--VNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETN---AIID--- 553
++ + ++ + D + F+ E+F++V++KGT+D L D+ + N +D
Sbjct: 120 RDRLAEQGTEGVEVVVADMLDLPFDRESFDLVIEKGTMDVLFVDSGDPWNPNPTTVDNVM 179
Query: 554 KYFSEIKRVLKLGGRFVCISLLQSHILAKLME 649
K I +VLK G FV I+ Q H + E
Sbjct: 180 KMLEGIHKVLKPEGIFVSITFGQPHFRRRFFE 211
>01_06_0299 +
28305447-28305729,28305892-28306104,28306915-28307043,
28307677-28307857,28308329-28308425,28309157-28309260,
28309734-28309785,28310040-28310252
Length = 423
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +2
Query: 290 ILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNV--NKARTNMKFMCMDATRMSF 463
+L G GN L L G+ N+T D SE I+ KN+ T++ F+ D
Sbjct: 251 VLDVGTGNGLLLQALAKQGFSNLTGTDYSEGAIELAKNLAARDGFTSINFLVDDILETKL 310
Query: 464 EDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGRFVCIS 613
D F +V DKGTLDA+ ++ Y+ + +++ GG V S
Sbjct: 311 -DRKFKIVTDKGTLDAIGLHPDGRIKRVM--YWESVSNLVEPGGIVVVTS 357
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 41.5 bits (93), Expect = 9e-04
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Frame = +2
Query: 224 EWYG-EYLELCGQLNKYI-KTKD----SILITGCGNSSLSADLYDVGYVNITNVDVSEVV 385
+W+G E +++ K + KD S+L G G+ LS L G+ ++T +D SE
Sbjct: 147 DWFGTENMDVLVSWTKNLCSNKDLRSCSVLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGA 206
Query: 386 IKQMKN--VNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDAL 514
I+ +N + ++ F+ D E F +V+D+GTLD +
Sbjct: 207 IEVARNLAIRDGFEHINFLVDDVLESKLE-RRFELVMDEGTLDTI 250
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 38.3 bits (85), Expect = 0.008
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +2
Query: 287 SILITGCGNSSLSADLY-DVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATR--M 457
S+L G G + +L + G+V +D E VIK+ +N+N N+ FMC D T +
Sbjct: 61 SVLELGAGIGRFTGELAKEAGHV--LALDFIESVIKKNENINGHHKNITFMCADVTSPDL 118
Query: 458 SFEDEAFNVVLDKGTLDALMPDATEETNAIIDKY---FSEIKRVLKLGGRF 601
+ ED + +++ L L + E+ + K+ F E K GG +
Sbjct: 119 TIEDNSIDLIFSNWLLMYLSDEEVEKLVGRMVKWLKIFKECHSYDKDGGSY 169
>01_06_0361 +
28733493-28733523,28733743-28733870,28733982-28734044,
28735074-28735211,28735357-28735494,28735700-28735843,
28736065-28736175,28736260-28736401,28736469-28736779,
28737057-28737218,28737313-28737366,28737472-28737546,
28737636-28737731
Length = 530
Score = 37.1 bits (82), Expect = 0.019
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +2
Query: 230 YGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVN 409
Y Y+ + L Y S+L G G + +L ++ +D E VIK+ +++N
Sbjct: 69 YSSYVVILSLLPPY--EGKSVLELGAGIGRFTGELVKTAG-HVLAMDFIESVIKKNESIN 125
Query: 410 KARTNMKFMCMDAT--RMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVL 583
N FMC D T + ED + +++ L L + EE ++K + R L
Sbjct: 126 GHHKNASFMCADVTCPDLMIEDNSIDLIFSNWLLMYL---SDEE----VEKLVKRMVRWL 178
Query: 584 KLGG 595
K+GG
Sbjct: 179 KVGG 182
>07_03_1543 +
27582033-27582387,27583638-27583706,27583790-27583809,
27584186-27584267,27584512-27584711
Length = 241
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +2
Query: 434 MCMDATRMS-FEDEAFNVVLDKGTLDALM 517
M MDA MS F DE+F+ +DKGTLD+LM
Sbjct: 120 MQMDARDMSIFSDESFDCAIDKGTLDSLM 148
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +2
Query: 203 KRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVD 370
+ G ++WY Y L + ++ + +L+ GCG++ + D D+ + + D
Sbjct: 81 EEGGAPYDWYQRYAALRPFVRRFAPPESRVLMIGCGSAHMQMDARDMSIFSDESFD 136
>01_07_0375 -
43152161-43152262,43152556-43152664,43153433-43153504,
43153690-43153834,43153930-43154085,43154557-43154618,
43154695-43155020
Length = 323
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 443 DATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKYFSEIKRVLKLGGRFVCISLLQ 622
DA +SFED + +D T+ + + T I+K SE RVLK GGRF+C+ L
Sbjct: 195 DAEALSFEDGS----MDGYTIAFGIRNVTH-----IEKALSEAYRVLKRGGRFLCLEL-- 243
Query: 623 SHI 631
SH+
Sbjct: 244 SHV 246
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = +2
Query: 368 DVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDAL 514
++ E++ ++ + + ++ +CM+A R++ E E + +D G DA+
Sbjct: 560 EIGEMMSREFTGMEDQPSELEVVCMEARRLAIEREESSTEIDSGDEDAI 608
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 576 LLISEKYLSIMAFVSSVASGIRASRVPLSNTTLNASSSKDILVASMHIN 430
LLI + ++ +V+ SG ASRV S T L++S + +L + +N
Sbjct: 152 LLIVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLQVN 200
>09_04_0654 -
19247051-19247305,19247466-19247534,19247618-19247705,
19248010-19248105,19248650-19248763,19248852-19248985,
19249880-19250326
Length = 400
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -2
Query: 609 MQTKRPPSFKTLL-ISEKYLSIMAFVSSVAS-GIRASRV 499
+Q + PP L +S+ Y S++ FV SVA G+ +SR+
Sbjct: 104 LQVRPPPPMPGFLPVSQSYSSLVRFVLSVARFGVESSRI 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,830,026
Number of Sequences: 37544
Number of extensions: 306807
Number of successful extensions: 690
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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