Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G24
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061160-1|AAL28708.1| 673|Drosophila melanogaster LD12777p pro... 213 3e-55
AE014134-3262|AAF53908.1| 673|Drosophila melanogaster CG2614-PA... 213 3e-55
AY122141-1|AAM52653.1| 309|Drosophila melanogaster GM25741p pro... 35 0.17
AE014298-1862|AAF48239.1| 301|Drosophila melanogaster CG2453-PA... 35 0.17
AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-P... 32 0.92
X79801-1|CAA56196.1| 438|Drosophila melanogaster DNA polymerase... 30 3.7
AY071217-1|AAL48839.1| 438|Drosophila melanogaster RE26079p pro... 30 3.7
AE014296-1426|AAF50439.1| 438|Drosophila melanogaster CG7108-PA... 30 3.7
>AY061160-1|AAL28708.1| 673|Drosophila melanogaster LD12777p
protein.
Length = 673
Score = 213 bits (520), Expect = 3e-55
Identities = 105/196 (53%), Positives = 135/196 (68%), Gaps = 3/196 (1%)
Frame = +2
Query: 203 KRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEV 382
KRG KAFEWYGEYLELC Q++KYIK D IL+ GCGNS LS D+YD G+ +ITN+D+S +
Sbjct: 23 KRGEKAFEWYGEYLELCDQIHKYIKPADRILMLGCGNSKLSMDMYDTGFRDITNIDISPI 82
Query: 383 VIKQMKNVN-KARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKY 559
+K+M +N K+R MKF+ MDAT M+F DE+F+V LDKGTLDAL D ET A+++ Y
Sbjct: 83 AVKKMLELNAKSRPEMKFLQMDATAMTFPDESFSVSLDKGTLDALFADDEPETRAVVENY 142
Query: 560 FSEIKRVLKLGGRFVCISLLQSHILAKLMEGFCEKSWMXRVVRCHEAEXXNAENS--DGP 733
F EI R ++ GGR+V ISLLQ HIL L++ + + M R+V C E N E + D
Sbjct: 143 FKEILRTMRNGGRYVGISLLQEHILNFLLDFLPKHNCMLRIVHCLGVEQANKEKNADDAL 202
Query: 734 XLRVXVVXAXKFXEMP 781
L V VV A KF +P
Sbjct: 203 TLPVFVVVATKFKSLP 218
Score = 42.7 bits (96), Expect = 6e-04
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +1
Query: 136 MNLLPRSHKEFSEKDYWNKFFXKTGK 213
MNLLP++ +EF++ DYWN+FF K G+
Sbjct: 1 MNLLPKTREEFAQTDYWNEFFKKRGE 26
>AE014134-3262|AAF53908.1| 673|Drosophila melanogaster CG2614-PA
protein.
Length = 673
Score = 213 bits (520), Expect = 3e-55
Identities = 105/196 (53%), Positives = 135/196 (68%), Gaps = 3/196 (1%)
Frame = +2
Query: 203 KRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEV 382
KRG KAFEWYGEYLELC Q++KYIK D IL+ GCGNS LS D+YD G+ +ITN+D+S +
Sbjct: 23 KRGEKAFEWYGEYLELCDQIHKYIKPADRILMLGCGNSKLSMDMYDTGFRDITNIDISPI 82
Query: 383 VIKQMKNVN-KARTNMKFMCMDATRMSFEDEAFNVVLDKGTLDALMPDATEETNAIIDKY 559
+K+M +N K+R MKF+ MDAT M+F DE+F+V LDKGTLDAL D ET A+++ Y
Sbjct: 83 AVKKMLELNAKSRPEMKFLQMDATAMTFPDESFSVSLDKGTLDALFADDEPETRAVVENY 142
Query: 560 FSEIKRVLKLGGRFVCISLLQSHILAKLMEGFCEKSWMXRVVRCHEAEXXNAENS--DGP 733
F EI R ++ GGR+V ISLLQ HIL L++ + + M R+V C E N E + D
Sbjct: 143 FKEILRTMRNGGRYVGISLLQEHILNFLLDFLPKHNCMLRIVHCLGVEQANKEKNADDAL 202
Query: 734 XLRVXVVXAXKFXEMP 781
L V VV A KF +P
Sbjct: 203 TLPVFVVVATKFKSLP 218
Score = 42.7 bits (96), Expect = 6e-04
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +1
Query: 136 MNLLPRSHKEFSEKDYWNKFFXKTGK 213
MNLLP++ +EF++ DYWN+FF K G+
Sbjct: 1 MNLLPKTREEFAQTDYWNEFFKKRGE 26
>AY122141-1|AAM52653.1| 309|Drosophila melanogaster GM25741p
protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.17
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +2
Query: 341 VGYVNITNVDVSEVVIKQMKNVNKARTN--MKFMCMDATRMSFEDEAFNVVLDKGTLDAL 514
V +N ++V E K++ +N + + C DA ++ F D +F T+
Sbjct: 145 VSDINQHMLNVGEERAKRLGLTTDQLSNCTVAWQCADAEKLPFPDASFTAY----TIAFG 200
Query: 515 MPDATEETNAIIDKYFSEIKRVLKLGGRFVCISLLQSHILAKLME 649
+ + T +DK SE RVL+ GGRF+C+ SH+ + M+
Sbjct: 201 IRNCTH-----VDKVLSEAYRVLQPGGRFMCLEF--SHLTNETMQ 238
>AE014298-1862|AAF48239.1| 301|Drosophila melanogaster CG2453-PA
protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.17
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +2
Query: 341 VGYVNITNVDVSEVVIKQMKNVNKARTN--MKFMCMDATRMSFEDEAFNVVLDKGTLDAL 514
V +N ++V E K++ +N + + C DA ++ F D +F T+
Sbjct: 137 VSDINQHMLNVGEERAKRLGLTTDQLSNCTVAWQCADAEKLPFPDASFTAY----TIAFG 192
Query: 515 MPDATEETNAIIDKYFSEIKRVLKLGGRFVCISLLQSHILAKLME 649
+ + T +DK SE RVL+ GGRF+C+ SH+ + M+
Sbjct: 193 IRNCTH-----VDKVLSEAYRVLQPGGRFMCLEF--SHLTNETMQ 230
>AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-PA
protein.
Length = 1150
Score = 32.3 bits (70), Expect = 0.92
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 275 KTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVN-KARTNMKFMCMDAT 451
+ KD +++ G + + + + ++N N + E+ + ++N+ K R + C+ T
Sbjct: 751 RRKDELILAGINHRTYN---FQNEWINFFNARIEELYSQDIENIKIKCRERL---CLPMT 804
Query: 452 RMSFEDEAFNVVLDK 496
EDE ++V LDK
Sbjct: 805 NNELEDEKYHVHLDK 819
>X79801-1|CAA56196.1| 438|Drosophila melanogaster DNA polymerase
subunit A protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 286 FNTDHWLW*FKFERGPIRCWICKY 357
F +H +W F RG I CW+C Y
Sbjct: 168 FGFEHIIWIFSGRRG-IHCWVCDY 190
>AY071217-1|AAL48839.1| 438|Drosophila melanogaster RE26079p
protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 286 FNTDHWLW*FKFERGPIRCWICKY 357
F +H +W F RG I CW+C Y
Sbjct: 168 FGFEHIIWIFSGRRG-IHCWVCDY 190
>AE014296-1426|AAF50439.1| 438|Drosophila melanogaster CG7108-PA
protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 286 FNTDHWLW*FKFERGPIRCWICKY 357
F +H +W F RG I CW+C Y
Sbjct: 168 FGFEHIIWIFSGRRG-IHCWVCDY 190
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,727,354
Number of Sequences: 53049
Number of extensions: 558258
Number of successful extensions: 1720
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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