Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G23
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 36 0.041
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 33 0.29
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 33 0.29
Z73098-1|CAA97330.2| 269|Caenorhabditis elegans Hypothetical pr... 33 0.39
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.51
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 31 1.2
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 31 1.2
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 31 1.2
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical ... 29 6.3
AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical ... 29 6.3
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 391 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVRH-NRAD 528
++ GD + +DG V GA+H AV L+ AA HV L VR +R D
Sbjct: 798 LQEGDEIVEIDGHNVEGASHSEAVVLLEAAAQNKHVKLIVRRPSRTD 844
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 391 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVR 513
+R GD+L V+G+ V G HQ VA++ R V LGV+
Sbjct: 1289 IRVGDVLLYVNGIAVEGKVHQEVVAMLRGGGDR--VVLGVQ 1327
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 391 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVR 513
+R GD+L V+G+ V G HQ VA++ R V LGV+
Sbjct: 1248 IRVGDVLLYVNGIAVEGKVHQEVVAMLRGGGDR--VVLGVQ 1286
>Z73098-1|CAA97330.2| 269|Caenorhabditis elegans Hypothetical
protein T21C9.1 protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 388 LVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHV 498
+VR GD + S DG+ +T TH AV V R+ GHV
Sbjct: 92 VVRTGDKILSFDGIDMTYKTHDEAVE-VFRSVKIGHV 127
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = -1
Query: 489 AVRGAAHERHGALVRGARHGHAVH*RQQVPRADQPLR----RPARHD--VTDSHSAPVFG 328
AV GA L RG H H H + + PR + + P D + S SAPV
Sbjct: 10 AVAGATFAAPSDLGRGHHHHHHHHHKTKAPRTSRGIATTTFAPTSSDLPIAGSSSAPVIA 69
Query: 327 AAHDPEPEPRGSAPQP 280
++ DP P PQP
Sbjct: 70 SSADP-ILPTSVVPQP 84
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 391 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVR 513
V+ GD+L V+GV + ATH+ A + A + ++TL R
Sbjct: 550 VKTGDVLLEVNGVVLRNATHKEAAEALRNAGNPVYLTLQYR 590
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 391 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVR 513
V+ GD+L V+GV + ATH+ A + A + ++TL R
Sbjct: 550 VKTGDVLLEVNGVVLRNATHKEAAEALRNAGNPVYLTLQYR 590
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like
protein DLG-1 protein.
Length = 967
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 391 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVR 513
V+ GD+L V+GV + ATH+ A + A + ++TL R
Sbjct: 550 VKTGDVLLEVNGVVLRNATHKEAAEALRNAGNPVYLTLQYR 590
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 421 DGVPVTGATHQRAVALVCRAAHRGHVTLGVRHNRADIQAMGVPA 552
+GVP+ G + ++ +VC A +TL + N A Q VPA
Sbjct: 379 EGVPLIGMYYVSSLLMVCLATCVNVITLNMHRNGAANQGRHVPA 422
>AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical
protein Y71H10A.1b protein.
Length = 578
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 406 LLTSVDGVPVTGATHQRAVALVCRAAHRGHVTL 504
+++S+D V T +HQRA + H G++ L
Sbjct: 12 IISSIDAVVATAQSHQRAFVIEVMGRHCGYLAL 44
>AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical
protein Y71H10A.1a protein.
Length = 814
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 406 LLTSVDGVPVTGATHQRAVALVCRAAHRGHVTL 504
+++S+D V T +HQRA + H G++ L
Sbjct: 215 IISSIDAVVATAQSHQRAFVIEVMGRHCGYLAL 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.130 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,200,860
Number of Sequences: 27780
Number of extensions: 232614
Number of successful extensions: 1064
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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