Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_G19
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...    75   1e-13
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...    75   1e-13
AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC...    75   1e-13
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...    75   1e-13
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...    75   1e-13
AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD...    75   1e-13
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...    75   1e-13

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 67  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 126

Query: 402 XRF 410
            RF
Sbjct: 127 RRF 129



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +2

Query: 485 RXSXDLDXRXMIRYCSVVXVIAHTQLKLLXQXQXXAXXMXXHLXGGXIDDKXXWA 649
           + S + D R M+RYC V+ VIAH+Q++L+ Q Q  A  M   L GG I+DK  WA
Sbjct: 154 KKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWA 208


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 56  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 115

Query: 402 XRF 410
            RF
Sbjct: 116 RRF 118



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +2

Query: 485 RXSXDLDXRXMIRYCSVVXVIAHTQLKLLXQXQXXAXXMXXHLXGGXIDDKXXWA 649
           + S + D R M+RYC V+ VIAH+Q++L+ Q Q  A  M   L GG I+DK  WA
Sbjct: 143 KKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWA 197


>AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC,
           isoform C protein.
          Length = 125

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 43  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 102

Query: 402 XRF 410
            RF
Sbjct: 103 RRF 105


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 43  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 102

Query: 402 XRF 410
            RF
Sbjct: 103 RRF 105



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +2

Query: 485 RXSXDLDXRXMIRYCSVVXVIAHTQLKLLXQXQXXAXXMXXHLXGGXIDDKXXWA 649
           + S + D R M+RYC V+ VIAH+Q++L+ Q Q  A  M   L GG I+DK  WA
Sbjct: 130 KKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWA 184


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 43  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 102

Query: 402 XRF 410
            RF
Sbjct: 103 RRF 105



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +2

Query: 485 RXSXDLDXRXMIRYCSVVXVIAHTQLKLLXQXQXXAXXMXXHLXGGXIDDKXXWA 649
           + S + D R M+RYC V+ VIAH+Q++L+ Q Q  A  M   L GG I+DK  WA
Sbjct: 130 KKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWA 184


>AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD,
           isoform D protein.
          Length = 161

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 56  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 115

Query: 402 XRF 410
            RF
Sbjct: 116 RRF 118


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 222 LVXKXXRPXTKPFLNEIVEAVTIIXTPPMVCVGVXGYLXTPXGLXPXXTVWAEHMSEXCR 401
           +V +  RP +K    E+VEAVT++ TPPM+ VG  GY+ TP GL     VWA+H+SE CR
Sbjct: 56  IVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECR 115

Query: 402 XRF 410
            RF
Sbjct: 116 RRF 118



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +2

Query: 485 RXSXDLDXRXMIRYCSVVXVIAHTQLKLLXQXQXXAXXMXXHLXGGXIDDKXXWA 649
           + S + D R M+RYC V+ VIAH+Q++L+ Q Q  A  M   L GG I+DK  WA
Sbjct: 143 KKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWA 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,862,696
Number of Sequences: 53049
Number of extensions: 235088
Number of successful extensions: 209
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)