Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G04
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 278 7e-76
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 65 1e-11
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 56 7e-09
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 29 0.89
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 28 1.6
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 28 2.1
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 2.1
SPBC56F2.03 |||actin-like protein Arp10 |Schizosaccharomyces pom... 27 3.6
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 4.8
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 6.3
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 26 8.3
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 278 bits (682), Expect = 7e-76
Identities = 126/225 (56%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
V+AR+Y+DRRCV++ KPLLESGTLGTKGNTQVVVP LTESY SSQDPPEKS PICTLKNF
Sbjct: 539 VEARMYVDRRCVFFEKPLLESGTLGTKGNTQVVVPHLTESYGSSQDPPEKSFPICTLKNF 598
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDPNFLDRCLKLPGTQPLDAIESVRN-AIN 363
PN IEHT+ WARD FEGLF+Q ++ YL PNFL+ LK + P + +E++R+ +
Sbjct: 599 PNRIEHTIAWARDLFEGLFKQPIDNVNMYLSSPNFLETSLK-TSSNPREVLENIRDYLVT 657
Query: 364 ERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDPN 543
E+P SF++C++WAR ++ + N I+QLL+NFP +T++G PFWSGPKR P+PL+FD +
Sbjct: 658 EKPLSFEECIMWARLQFDKFFNNNIQQLLFNFPKDSVTSTGQPFWSGPKRAPTPLSFDIH 717
Query: 544 DELHVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQVPKFSPQ 678
+ H D+IVAAA+L A YG+ S D ++ A P F+P+
Sbjct: 718 NREHFDFIVAAASLYAFNYGLKSETDPAIYERVLAGYNPPPFAPK 762
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 520 SPLAFDPNDEL--HVDYIVAAANLRATVYGI 606
+P F+ +D+ H+D+I AA+NLRA Y I
Sbjct: 806 TPAEFEKDDDSNHHIDFITAASNLRAMNYDI 836
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 64.9 bits (151), Expect = 1e-11
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
+DAR +++++C+ PL+ESGT G G QV++ TE Y + P K+ P+CT+++
Sbjct: 127 LDARRHVNKQCLLASVPLIESGTTGFLGQVQVIIHGKTECYDCNPKEPPKTYPVCTIRST 186
Query: 187 PNAIEHTLQWARDEF 231
P+ H + WA+ F
Sbjct: 187 PSQPIHCVVWAKSYF 201
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1
Query: 508 KRCPSPLAFDPNDELHVDYIVAAANLRATVYGIPSCVDRENIAKLAASI 654
K L+FD +D+ +D++ AAANLRA V+GI + +I ++A +I
Sbjct: 328 KSSKDDLSFDKDDKDTLDFVAAAANLRAHVFGIQQ-LSEFDIKQMAGNI 375
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 56.0 bits (129), Expect = 7e-09
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 55 PLLESGTLGTKGNTQVVVPFLTESYSSSQD--PPEKSIPICTLKNFPNAIEHTLQWA 219
PL++ G+ G KG +V++P +T Y S D P+ S PICTL N P EH ++WA
Sbjct: 165 PLVDGGSEGLKGQARVIIPTITSCYECSLDMLTPKISYPICTLANTPRLPEHCVEWA 221
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 29.1 bits (62), Expect = 0.89
Identities = 22/99 (22%), Positives = 43/99 (43%)
Frame = +1
Query: 94 TQVVVPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFRQAAEHAAQY 273
T+ + F Y+ QD + PI +K+ N I+ A+DE + + + A + +
Sbjct: 41 TKTKLDFFYVCYNHLQDRGFAT-PISVIKSVTNKIDTNKLEAKDESKNVEKDATGNPQES 99
Query: 274 LQDPNFLDRCLKLPGTQPLDAIESVRNAINERPRSFDDC 390
Q+PN + + +D+ + +IN S +C
Sbjct: 100 KQEPNL--EVQQTEKEKDVDSASAENESINSSSSSSKEC 136
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 494 SGPDRSVVLHPSPSILMMNYTSI 562
SGP RS VL+PS S M NYT +
Sbjct: 393 SGPSRSTVLNPSTS-RMSNYTGL 414
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 367 RPRSFDDCVIWARHHWENQYANQIKQLLYNFPAK-QLTTSGAPFWSGPKRCPSPLAF 534
R + FD + H+ +N+ + + K L+ N PA +L +G P + K S LAF
Sbjct: 533 RKQRFDISIFDEGHYLKNRMSERYKHLM-NIPANFRLLITGTPLQNNLKELISLLAF 588
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 373 RSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAF 534
++FD CV H+ +N+ + + K L+ +L +G P + K S LAF
Sbjct: 673 QNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSLLAF 726
>SPBC56F2.03 |||actin-like protein Arp10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 475 TTSGAPFWSGPKR-CPSPLAFDPNDELHVDYIVAAANLRATVYGIPSCVDREN 630
TT+ W+G C S L +DP+D H+ + + + L +YG + EN
Sbjct: 326 TTADMMAWNGASTTCESQLDYDPDDPKHLRHSIVESPL---LYGQDQYFNGEN 375
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 112 FLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARD 225
+L S+ ++ E SIPICTL+ F + Q R+
Sbjct: 325 YLLRSFGAALKQFESSIPICTLQLFMDCPSELYQTRRE 362
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 535 DPNDELHVDYIVAAANLRATVYGIPSCVDREN 630
DP+D ++ ++ AN + T Y P+ +DR N
Sbjct: 812 DPDDVYNILSFLSFANSQVTSYTPPNSIDRPN 843
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 493 FWSGPKRCPSPLAFDPND 546
F S K+CPS LA DPN+
Sbjct: 200 FASHAKQCPSFLAMDPNN 217
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,525,149
Number of Sequences: 5004
Number of extensions: 76929
Number of successful extensions: 231
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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