Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G04
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 221 6e-58
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 221 6e-58
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 214 7e-56
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 212 3e-55
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 61 1e-09
01_01_1178 + 9385261-9385374,9385457-9385620,9386251-9386453,938... 46 5e-05
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 29 6.6
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 28 8.7
05_03_0592 + 15909437-15911002 28 8.7
01_06_0475 + 29610268-29610711 28 8.7
>12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 221 bits (540), Expect = 6e-58
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 5/229 (2%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
V AR+Y+D RCVY++KPLLESGTLG K NTQ+V+P LTE+Y +S+DPPEK P+CT+ +F
Sbjct: 576 VTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSF 635
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDPNFLDRCLKLPG-TQPLDAIESVRNAI- 360
P+ I+H L WAR EFEGL + +L +P + G Q D +E V +
Sbjct: 636 PHNIDHCLTWARSEFEGLLEKTPTEVNAFLSNPGGYATVARTAGDAQARDQLERVIECLE 695
Query: 361 NERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDP 540
E+ +F DC+ WAR +E+ ++N++KQL Y FP +T+SGAPFWS PKR P PL F
Sbjct: 696 REKCETFQDCITWARLKFEDYFSNRVKQLTYTFPEDAMTSSGAPFWSAPKRFPRPLEFLT 755
Query: 541 NDELHVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQ---VPKFSPQ 678
+D +++I+AAA LRA +GIP +N AK+A ++ VP F P+
Sbjct: 756 SDPSQLNFILAAAILRAETFGIPIPDWVKNPAKMAEAVDKVIVPDFQPK 804
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 523 PLAFDPNDEL--HVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQVP 663
P+ F+ +D+ H+D I AN+RA Y IP VD+ AK A +P
Sbjct: 851 PIQFEKDDDTNYHMDVIAGFANMRARNYSIPE-VDKLK-AKFIAGRIIP 897
>11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 221 bits (540), Expect = 6e-58
Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 5/229 (2%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
V AR+Y+D RCVY++KPLLESGTLG K NTQ+V+P LTE+Y +S+DPPEK P+CT+ +F
Sbjct: 700 VTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSF 759
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDPNFLDRCLKLPG-TQPLDAIESVRNAI- 360
P+ I+H L WAR EFEGL + +L +P + G Q D +E V +
Sbjct: 760 PHNIDHCLTWARSEFEGLLEKTPTEVNAFLSNPGGYATVARTAGDAQARDQLERVIECLE 819
Query: 361 NERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDP 540
E+ +F DC+ WAR +E+ ++N++KQL Y FP +T+SGAPFWS PKR P PL F
Sbjct: 820 REKCETFQDCITWARLKFEDYFSNRVKQLTYTFPEDAMTSSGAPFWSAPKRFPRPLEFLT 879
Query: 541 NDELHVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQ---VPKFSPQ 678
+D +++I+AAA LRA +GIP +N AK+A ++ VP F P+
Sbjct: 880 SDPSQLNFILAAAILRAETFGIPIPDWVKNPAKMAEAVDKVIVPDFQPK 928
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 523 PLAFDPNDEL--HVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQVP 663
P+ F+ +D+ H+D I AN+RA Y IP VD+ AK A +P
Sbjct: 975 PIQFEKDDDTNYHMDVIAGFANMRARNYSIPE-VDKLK-AKFIAGRIIP 1021
>07_03_1774 + 29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 214 bits (523), Expect = 7e-56
Identities = 102/229 (44%), Positives = 149/229 (65%), Gaps = 5/229 (2%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
V+AR+YMD RC+Y++K LLESGTLG K NTQ+V+P LTE+Y +S+DPPEK P+CT+ +F
Sbjct: 607 VNARMYMDMRCLYFQKALLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSF 666
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDPNFLDRCLKLPG-TQPLDAIESVRNAI- 360
P+ I+H L WAR EFEGL + +L +P ++ G Q + +E V +
Sbjct: 667 PHNIDHCLTWARSEFEGLLEKTPGEVNSFLSNPAQYAAAMRKAGDAQARELLERVSECLG 726
Query: 361 NERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDP 540
ER F+DC+ WAR +E+ ++N++KQL + FP T++GAPFWS PKR P PL F
Sbjct: 727 KERCSLFEDCIRWARLKFEDYFSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPRPLQFSV 786
Query: 541 NDELHVDYIVAAANLRATVYGIPSCVDRENIAKLA---ASIQVPKFSPQ 678
+D H+ +I++A+ LRA +GI +N +KLA + + VP+F P+
Sbjct: 787 SDPSHIHFIMSASILRAESFGIAIPDWAKNTSKLADAVSEVAVPQFEPK 835
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 523 PLAFDPNDE--LHVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQVP 663
P+ F+ +D+ H+D I AN+RA Y IP VD+ AK A +P
Sbjct: 882 PIQFEKDDDTNFHMDLISGFANMRARNYSIPE-VDKLK-AKFIAGRIIP 928
>03_02_0665 - 10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 212 bits (518), Expect = 3e-55
Identities = 100/229 (43%), Positives = 148/229 (64%), Gaps = 5/229 (2%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
V+AR+YMD RC+Y++KPLLESGTLG K NTQ+V+P LTE+Y +S+DPPEK P+CT+ +F
Sbjct: 701 VNARMYMDMRCLYFQKPLLESGTLGPKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSF 760
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDPNFLDRCLKLPG-TQPLDAIESVRNAIN 363
P+ I+H L WAR EFEGL + ++ +P ++ G Q + +E V ++
Sbjct: 761 PHNIDHCLTWARSEFEGLLEKTPNEVNSFISNPAQYAAAMRKAGDAQARELLERVCECLD 820
Query: 364 -ERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDP 540
ER F+DC+ WAR +E+ +AN++KQL + FP +T++GA FWS PKR P PL F
Sbjct: 821 KERCDGFEDCIAWARLKFEDYFANRVKQLTFTFPEDAVTSTGAFFWSAPKRFPRPLQFST 880
Query: 541 NDELHVDYIVAAANLRATVYG--IPS-CVDRENIAKLAASIQVPKFSPQ 678
+ H+ +I+AA+ LRA +G IP + N+ + + VP+F P+
Sbjct: 881 VNSSHIHFILAASILRAVSFGISIPDWAKNTSNLVDAVSKVVVPEFEPK 929
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
+DAR +++R C+ PL+ESGT G G V V TE Y P KS P+CT+ +
Sbjct: 119 LDARRHVNRLCLAAEVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITST 178
Query: 187 PNAIEHTLQWARD 225
P+ H + WA++
Sbjct: 179 PSKFVHCIVWAKE 191
Score = 37.1 bits (82), Expect = 0.019
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 526 LAFDPNDELHVDYIVAAANLRATVYGIP 609
L FD +D+L V+++ AAN+RA+ +GIP
Sbjct: 319 LVFDKDDQLAVEFVTTAANIRASSFGIP 346
>01_01_1178 +
9385261-9385374,9385457-9385620,9386251-9386453,
9387130-9387362,9387584-9387640,9388120-9388241,
9388366-9388425,9388426-9388543,9389005-9389286
Length = 450
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 52 KPLLESGTLGTKGNTQVVVPFLTESYSSS--QDPPEKSIPICTLKNFPNAIEHTLQWA 219
KP+++ GT G KG+ +V++P T + + PP+ P+CTL P H +++A
Sbjct: 174 KPMVDGGTEGFKGHARVIIPGTTPCFECNIWLFPPQVKFPLCTLAETPRTAAHCIEYA 231
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 IHGQTVCV-L*KTFIGEWHSWN*RKYTGGCSIPYGILQLIPGPSREEYSYLYAQEL 185
+HG+ + + + + GE H W R YTG C Q + G +Y++L+ L
Sbjct: 522 VHGRLIVIGMISQYQGE-HGWKPRNYTGLCDKILAKSQTVAGFFLIQYAHLWQDHL 576
>09_03_0179 -
13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 301 CLKLPGTQPLDAIE----SVRNAINERPRSFDDC 390
CLKL G Q E +RNA+ E R F+DC
Sbjct: 759 CLKLAGEQEKMVSERWLPELRNAVQEAQRCFEDC 792
>05_03_0592 + 15909437-15911002
Length = 521
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 298 GPRNSGPASIGQHAQQPDGINLRIHREPIVVCVQWHSG 185
G R G A+ +H ++PD + L VV +W G
Sbjct: 239 GRRKPGTATSARHQEEPDDLELAAAAAADVVVAEWAGG 276
>01_06_0475 + 29610268-29610711
Length = 147
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 37 CVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIP 165
C Y R LL S T T V + + ++Y+ DP + P
Sbjct: 91 CAYRRLALLSSSRAATHPGTNVALSLIHDAYAILSDPNHRPRP 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,079,925
Number of Sequences: 37544
Number of extensions: 543977
Number of successful extensions: 1524
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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