Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_G04
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 268 3e-72
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 268 3e-72
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 47 2e-05
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 32 0.64
U80839-8|AAB37914.1| 238|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 29 5.9
AC006708-14|AAT81172.1| 273|Caenorhabditis elegans Metaphase-to... 29 5.9
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 29 5.9
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 268 bits (658), Expect = 3e-72
Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 2/226 (0%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
VDAR YMDRRCVYYR PLLESGT+GTKGNTQVV P+LTESYSSS DPPEK IP+CTLKNF
Sbjct: 542 VDARRYMDRRCVYYRLPLLESGTMGTKGNTQVVYPYLTESYSSSVDPPEKEIPVCTLKNF 601
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDP-NFLDRCLKLPGTQPLDAIESVRNA-I 360
PN I+HT+QWAR++FE F Q E A ++L D F + KL Q +D ++ V++A I
Sbjct: 602 PNEIQHTIQWAREQFETFFAQPGEMANKFLSDERGFNEHVDKLISGQQIDILQKVKDALI 661
Query: 361 NERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDP 540
+ RP S +DC+ WAR+ ++ Y N I Q+L++FP QLT SGA FWSG KRCP L FDP
Sbjct: 662 DARPSSAEDCIRWARNQFQELYHNNIAQMLHSFPPDQLTDSGAKFWSGAKRCPHVLNFDP 721
Query: 541 NDELHVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQVPKFSPQ 678
+ E H +++ AA+ L A +YG+ +DRE + ++A S+ F P+
Sbjct: 722 SKEEHFNFVFAASILIAELYGVQPILDREEVIRVALSVNPEPFEPK 767
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 268 bits (658), Expect = 3e-72
Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 2/226 (0%)
Frame = +1
Query: 7 VDARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNF 186
VDAR YMDRRCVYYR PLLESGT+GTKGNTQVV P+LTESYSSS DPPEK IP+CTLKNF
Sbjct: 627 VDARRYMDRRCVYYRLPLLESGTMGTKGNTQVVYPYLTESYSSSVDPPEKEIPVCTLKNF 686
Query: 187 PNAIEHTLQWARDEFEGLFRQAAEHAAQYLQDP-NFLDRCLKLPGTQPLDAIESVRNA-I 360
PN I+HT+QWAR++FE F Q E A ++L D F + KL Q +D ++ V++A I
Sbjct: 687 PNEIQHTIQWAREQFETFFAQPGEMANKFLSDERGFNEHVDKLISGQQIDILQKVKDALI 746
Query: 361 NERPRSFDDCVIWARHHWENQYANQIKQLLYNFPAKQLTTSGAPFWSGPKRCPSPLAFDP 540
+ RP S +DC+ WAR+ ++ Y N I Q+L++FP QLT SGA FWSG KRCP L FDP
Sbjct: 747 DARPSSAEDCIRWARNQFQELYHNNIAQMLHSFPPDQLTDSGAKFWSGAKRCPHVLNFDP 806
Query: 541 NDELHVDYIVAAANLRATVYGIPSCVDRENIAKLAASIQVPKFSPQ 678
+ E H +++ AA+ L A +YG+ +DRE + ++A S+ F P+
Sbjct: 807 SKEEHFNFVFAASILIAELYGVQPILDREEVIRVALSVNPEPFEPK 852
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 13 ARIYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEK-SIPICTLKNFP 189
AR Y++R C +PL++SG+ G G V++ TE Y P ++ + P CT++N P
Sbjct: 117 ARNYVNRMCHAANRPLIDSGSGGYFGQVSVIMRGKTECYECVDKPVQQTTYPGCTIRNTP 176
Query: 190 NAIEHTLQWARDEFEGLF 243
+ H WA+ F LF
Sbjct: 177 SEHIHCTVWAKHVFNQLF 194
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 526 LAFDPNDELHVDYIVAAANLRATVYGIP 609
LAFD + + + ++ A AN+RA ++GIP
Sbjct: 332 LAFDKDHAIIMSFVAACANIRAKIFGIP 359
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 55 PLLESGTLGTKGNTQVVVPFLTESYSSSQD--PPEKSIPICTLKNFPNAIEHTLQWAR 222
P+++ GT G KGN +V+ P T + D PP+ + P+CT+ + P EH +++ +
Sbjct: 171 PMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAHTPRLPEHCIEYIK 228
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 526 LAFDPNDELHVDYIVAAANLRATVYGIPSCVDR 624
++ D +D +HV++++ A+LRA Y I VDR
Sbjct: 241 VSLDADDPIHVEWVLERASLRAEKYNIRG-VDR 272
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -1
Query: 417 LPMMSRPYHAVVETARAFVYSVSHTLNSIQRLSTRQFKTAV 295
LP++SR YHA+ E +R+ +V + NS +LS +Q +T V
Sbjct: 369 LPLVSRSYHAITEISRSTARAVLNADNS--KLSIQQSETVV 407
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 197 MAFGKFLSVQIGILFSGGSWDEL*DSVRNGTTTCVFPLVPRVPLSNKGFL 48
M F + G +FS GSW ++ DS+ T+ C F + +P+ + G L
Sbjct: 157 MQMSMFSDMMDGSMFSNGSWSDIADSMI--TSNCTFTVRKGLPIDDDGDL 204
>U80839-8|AAB37914.1| 238|Caenorhabditis elegans Hypothetical
protein ZC204.10 protein.
Length = 238
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 127 YSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFRQAAEHAAQYLQD 282
+S + DP E +P CT+K F + I H + EG+ Q + YL+D
Sbjct: 90 HSVNSDPEEFYVPGCTVKQFIDHIAHIF----FQNEGMLIQIVNLQSDYLKD 137
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 325 PLDAIESVRNAINERPR--SFDDCVIWARHHWENQYANQIKQLL 450
P DA ++ + I+E + +FDD + A H+E +N + LL
Sbjct: 22 PADAHRTIEDEIHEMMKCYAFDDAIFLAELHYETDKSNNSESLL 65
>AC006708-14|AAT81172.1| 273|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform b protein.
Length = 273
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 325 PLDAIESVRNAINERPR--SFDDCVIWARHHWENQYANQIKQLL 450
P DA ++ + I+E + +FDD + A H+E +N + LL
Sbjct: 22 PADAHRTIEDEIHEMMKCYAFDDAIFLAELHYETDKSNNSESLL 65
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 325 PLDAIESVRNAINERPR--SFDDCVIWARHHWENQYANQIKQLL 450
P DA ++ + I+E + +FDD + A H+E +N + LL
Sbjct: 22 PADAHRTIEDEIHEMMKCYAFDDAIFLAELHYETDKSNNSESLL 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,789,584
Number of Sequences: 27780
Number of extensions: 449701
Number of successful extensions: 1297
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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