Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_F23
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0896 - 12233706-12233801,12234005-12234181,12234741-122348...    31   0.96 
11_06_0423 + 23349588-23350084,23350133-23350346                       30   2.9  
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377...    30   2.9  
06_03_0697 - 23621808-23622127,23622194-23622932,23623298-236233...    29   3.9  
05_06_0099 + 25572530-25573603,25574178-25574633,25575165-25575449     29   5.1  
07_03_1107 - 24024387-24024497,24025799-24026410                       28   8.9  

>03_02_0896 -
           12233706-12233801,12234005-12234181,12234741-12234854,
           12234928-12235006,12235372-12235533,12235957-12236079,
           12236139-12236218
          Length = 276

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 606 NAKLQQHMPGFLDDSIYSGTLNLFSGCTSSAEACIKQASGADI 734
           N K+ Q +PG     +Y G+L+   GCT   E   K + G DI
Sbjct: 74  NEKMAQSVPGI---KVYGGSLDNVKGCTDQVENGTKLSLGKDI 113


>11_06_0423 + 23349588-23350084,23350133-23350346
          Length = 236

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +3

Query: 333 EKTNQQFTITELEDPNASTDSQKPECKPTKTRVRGGKACAGQTIFEEQFDSLDENVWQI 509
           E    Q  IT  E+  A  DS +P C    ++     + AG++  E   D LDE +  I
Sbjct: 11  ESQFNQCAITAEEEAAALPDSTEPPCTNVASQDEESGSAAGESESESDSDDLDEVIADI 69


>03_05_1019 +
           29736644-29736709,29737156-29737515,29737595-29737735,
           29737912-29738044,29738344-29738457,29738553-29738701,
           29740815-29740907,29741019-29741079,29741180-29741512,
           29742149-29742224,29742322-29742421,29743300-29743369,
           29743987-29744082,29744355-29744402,29744427-29744658,
           29745186-29745246,29745265-29745375
          Length = 747

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 580 LPQMETYILTPNFNNICPAFWTTLYILAHLICSVGVLRQQKHASNRLPVLIF 735
           L Q+E  +L PN+N + P+  T L    +  C+    R +   + ++ +  F
Sbjct: 654 LQQLEAVVLVPNYNRLMPSGRTFLNFFNNANCAAAAKRSRFKGATKMGITDF 705


>06_03_0697 -
           23621808-23622127,23622194-23622932,23623298-23623327,
           23624183-23624200,23625176-23625268,23625665-23626123
          Length = 552

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 120 EYPXQDVPKMTLFAFQGNLNHKLDSTSVGTLSAEVLDPVN 239
           +YP  D      +++   L H +D    G+L +E L P N
Sbjct: 349 QYPNYDFNNNNAWSYHDPLGHPIDQVDFGSLRSEYLSPNN 388


>05_06_0099 + 25572530-25573603,25574178-25574633,25575165-25575449
          Length = 604

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = -2

Query: 195 CYPVYGSSCLGTRTVSFWGHLEXDIRSPFGRKACIFTSGI*AYDIFINKIRHNTRPHIAA 16
           C  VY +S         W   E   R P+GRK  +++ G+  +++F   I +     + A
Sbjct: 444 CEEVYCNSLEDDPGTYRWMAPEMYKRKPYGRKVDVYSFGLVLWELFSGSIPYEEMTPLQA 503

Query: 15  AIFVL 1
           A  V+
Sbjct: 504 AFAVV 508


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 514 CSICQTFSSRES---NCSSNIVCPAHALPPRTL 425
           C IC  FSSR +   +CS ++   +H L  RTL
Sbjct: 206 CPICDVFSSRCAAYLDCSCSVTALSHRLKTRTL 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,213,706
Number of Sequences: 37544
Number of extensions: 462880
Number of successful extensions: 1335
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)