Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_F22
         (833 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.93 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = +2

Query: 476 SEIDSPVGTPQPPAIPNQVSPP-------GPIPTQTFTNQHYVQ 586
           S + SP G+     +P+Q  PP       GPIP+Q    QH  Q
Sbjct: 216 STLSSPSGSRMEYLLPHQQHPPGAGVQGAGPIPSQQKHQQHQQQ 259


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 494 VGTPQPPAIPNQVSPPG 544
           +GTP PP  P  V P G
Sbjct: 145 LGTPGPPGYPGDVGPKG 161


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
 Frame = +2

Query: 458 FFFLQESEIDSPVGTP-----QPPAIPNQVSPPGPIPT 556
           FF L  +++  P G P     QPP  P    P GP P+
Sbjct: 559 FFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPS 596


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 689 QRVPVQTLHALDAVENEAEAAWACCQV 609
           Q+V    LHA    ENEA  A +C Q+
Sbjct: 285 QKVQHLALHAFHNTENEAMRAESCYQL 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,831
Number of Sequences: 2352
Number of extensions: 11961
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)