Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_F15
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    32   0.46 
Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical pr...    31   0.81 
U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork head/HNF-3...    31   0.81 
U28928-10|AAN63432.2|  388|Caenorhabditis elegans Hypothetical p...    30   1.9  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical p...    28   10.0 

>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
           protein Y40C5A.3 protein.
          Length = 2344

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -3

Query: 694 HSRAECPYVNMCADFSVKVPSPSGTTKCMPPWGDSS---ENSIPILSPRPSPTK*AASSG 524
           H  A  P         V  P+PS   K   P G+S    E SIP ++P PSP++ ++S  
Sbjct: 541 HEMAPAPAPQPSPSSPVYGPTPSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGP 600

Query: 523 I 521
           I
Sbjct: 601 I 601


>Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical
           protein F38A6.1c protein.
          Length = 411

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +3

Query: 606 GMHFVVPEGEGTLTEKSAHMFTYGHSARLWSHVWIVLLSLALGNWNSLLMNASQLFMWRT 785
           G    + E E T+TEK     TYG S   +S  +I L+++A+   NS  +  S+++ W  
Sbjct: 116 GQELTIQEFE-TVTEKIRRHGTYGQSKPPYS--YISLITMAIQKSNSRQLTLSEIYNWIM 172

Query: 786 SXCYYXPDHRRK 821
               Y  +++++
Sbjct: 173 DLFPYYQNNQQR 184


>Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical
           protein F38A6.1b protein.
          Length = 442

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +3

Query: 606 GMHFVVPEGEGTLTEKSAHMFTYGHSARLWSHVWIVLLSLALGNWNSLLMNASQLFMWRT 785
           G    + E E T+TEK     TYG S   +S  +I L+++A+   NS  +  S+++ W  
Sbjct: 147 GQELTIQEFE-TVTEKIRRHGTYGQSKPPYS--YISLITMAIQKSNSRQLTLSEIYNWIM 203

Query: 786 SXCYYXPDHRRK 821
               Y  +++++
Sbjct: 204 DLFPYYQNNQQR 215


>Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical
           protein F38A6.1a protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +3

Query: 606 GMHFVVPEGEGTLTEKSAHMFTYGHSARLWSHVWIVLLSLALGNWNSLLMNASQLFMWRT 785
           G    + E E T+TEK     TYG S   +S  +I L+++A+   NS  +  S+++ W  
Sbjct: 211 GQELTIQEFE-TVTEKIRRHGTYGQSKPPYS--YISLITMAIQKSNSRQLTLSEIYNWIM 267

Query: 786 SXCYYXPDHRRK 821
               Y  +++++
Sbjct: 268 DLFPYYQNNQQR 279


>U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork
           head/HNF-3-like protein protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +3

Query: 606 GMHFVVPEGEGTLTEKSAHMFTYGHSARLWSHVWIVLLSLALGNWNSLLMNASQLFMWRT 785
           G    + E E T+TEK     TYG S   +S  +I L+++A+   NS  +  S+++ W  
Sbjct: 211 GQELTIQEFE-TVTEKIRRHGTYGQSKPPYS--YISLITMAIQKSNSRQLTLSEIYNWIM 267

Query: 786 SXCYYXPDHRRK 821
               Y  +++++
Sbjct: 268 DLFPYYQNNQQR 279


>U28928-10|AAN63432.2|  388|Caenorhabditis elegans Hypothetical
           protein C44B7.12 protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +3

Query: 192 DNCRPFKLAHQILSLTGISFERRSVIGFVELTVVPLKDNLRYIRLNAKQSRIY 350
           D   PF+ A  IL L G + +R +VI  VEL+  P  D  R ++L     R +
Sbjct: 186 DRRMPFETAAHILGLIGEAQQRTNVIVGVELSGDPHLDGRRLLKLFVAARRFH 238


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
            F35A5.1 protein.
          Length = 1274

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 637  PSPSGTTKCMPPWGDSSENSIPILSPRP 554
            P  +   K  PPW D  E S P+ +P P
Sbjct: 1046 PVKNPVKKWKPPWEDDDEPSEPVSAPEP 1073


>U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK1248.1 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 698 PCVDSFAEPCTWKLE 742
           PCVD +A  C WK+E
Sbjct: 42  PCVDFYAHVCPWKVE 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,515,323
Number of Sequences: 27780
Number of extensions: 456385
Number of successful extensions: 1156
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)