Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_F01
         (814 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488...    31   1.4  
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272...    29   5.8  
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082...    29   5.8  
04_04_0136 - 23034715-23034794,23034930-23035104                       29   5.8  
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334     29   5.8  
03_04_0148 - 17708737-17709027,17709270-17709518,17709713-177098...    28   7.7  

>03_05_0890 -
           28547462-28547545,28548451-28548528,28548641-28548814,
           28548902-28548958,28549065-28549116,28549907-28549995,
           28550259-28550344,28550427-28550637,28551790-28551882,
           28551958-28552098,28552175-28552267,28553879-28554113,
           28554263-28554435,28555234-28556571,28556668-28556853,
           28557625-28557713,28557756-28557905,28557951-28558596
          Length = 1324

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/90 (21%), Positives = 40/90 (44%)
 Frame = +3

Query: 141 NSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEAT 320
           N KWK +  +            ++ K+ +S T +  S+W+P P SP+    ++  P +  
Sbjct: 518 NLKWKRSQEIKPVKFLSPLDTTDVKKEVESPTRERISSWKPFP-SPVPKPPKDPTPIKEE 576

Query: 321 KLHMKLVTTFRLKSRXYLKTVGDNQDNTAL 410
             + K  T   + S+  L +  ++  + +L
Sbjct: 577 SPNKKTDTPPAVSSQAELNSPVESTSHQSL 606


>12_01_0357 +
           2720860-2721066,2721169-2721384,2721481-2723608,
           2723699-2724124,2724242-2724546,2724660-2724823,
           2724899-2724980
          Length = 1175

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 113 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDF-RPKVQL 256
           PQ   + + +QQ++ Q   +Q++  Y P  Q+Y+Q      + +P+ Q+
Sbjct: 238 PQTPTAEQYQQQLQYQQYYQQHYPGYNPYMQQYQQYGQYQQYTQPQTQI 286


>05_05_0201 +
           23206859-23206998,23207858-23207936,23208121-23208219,
           23208561-23208674,23208762-23208910,23209010-23209091,
           23209170-23209255,23209520-23209750,23209830-23210727
          Length = 625

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +3

Query: 150 WKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 323
           W   + +N T+    P+   +  QN  + S   +N  P P+SP +   R + P+ ATK
Sbjct: 488 WAMPASVNSTNP-FQPATYQM--QNPPVASVAPTNTYPAPSSPYAAPPRQQVPSPATK 542


>04_04_0136 - 23034715-23034794,23034930-23035104
          Length = 84

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 231 STGFACLYSCCW 196
           +TGFAC YSCC+
Sbjct: 2   ATGFACAYSCCY 13


>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
          Length = 554

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 156 TNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPV 266
           T S L K S    P   +++++   MTS+   +W P+
Sbjct: 77  TTSELEKDSNAAKPCRSDMNREPTKMTSEATRSWCPI 113


>03_04_0148 -
           17708737-17709027,17709270-17709518,17709713-17709851,
           17710050-17710268,17710360-17710735,17711741-17711909
          Length = 480

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 140 EQQVEDQLPLEQNFNNYQ-PQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 301
           E QVE    L++  +  + P   + R A     FR   +LE   YIP+   DKE+
Sbjct: 99  EAQVETTNQLKRIVDCIEKPLSNKVRHALETPSFRRMKRLEARLYIPLYEEDKEE 153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,417,647
Number of Sequences: 37544
Number of extensions: 402320
Number of successful extensions: 1317
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)