Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_F01
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-5|CAA93851.2| 197|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 3.0
L11247-8|AAY86263.1| 196|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 29 4.0
AF025461-3|AAB70998.3| 632|Caenorhabditis elegans Hypothetical ... 29 4.0
AF003385-5|AAB54245.1| 494|Caenorhabditis elegans Hypothetical ... 29 4.0
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 29 5.2
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 29 5.2
Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL032647-2|CAA21689.1| 178|Caenorhabditis elegans Hypothetical ... 28 6.9
AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 28 6.9
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 28 6.9
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 28 6.9
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 28 6.9
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 28 6.9
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 28 6.9
Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical pr... 28 9.1
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 28 9.1
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 28 9.1
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 28 9.1
>Z70034-5|CAA93851.2| 197|Caenorhabditis elegans Hypothetical
protein C18E9.5 protein.
Length = 197
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 283 DNGDVGTGLQLDFRSEVIDWFCLSIFLLLGLIVV 182
D+ D G + + RSE++DW + I ++LGL+ +
Sbjct: 13 DDFDYGDNVSIIDRSEIVDWSAIVIKIILGLVFI 46
>Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical
protein F42G4.2 protein.
Length = 429
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 138 QNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNW 257
+NSK + SH N + + PS+ DK SDL N+
Sbjct: 132 KNSKTSSESHKNDSDGSKEPSDNADDKNKPKFNSDLAKNF 171
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 116 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETST 268
Q + ++P+QQ P+ N N QQ YR + RP VQ++ T
Sbjct: 23 QMRPVMQPQQQRTMYYPVRTNCQNRCNQQTRYRWNVRPTNIRPNVQVQIRT 73
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 177 TSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTE 314
T+TT P RN +K+N+S +S + T+P + + P E
Sbjct: 422 TTTTPKPVPRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKE 467
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 137 PEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPK-VQLETSTYI---PIIRFDKEQG 304
P+QQ + Q + Y+PQQQ+Y Q P D RP+ V+ YI P R +
Sbjct: 73 PQQQFQRQGQSQYIQQQYRPQQQQYSQ-YPRFDLRPQPVRPVRPVYIASTPASRLSYTER 131
Query: 305 TDGSYKTSYETGNNIQAQ 358
SY E N + +
Sbjct: 132 PQTSYGDEIEDTNYLSGR 149
>L11247-8|AAY86263.1| 196|Caenorhabditis elegans Hypothetical
protein F09G8.10 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 538 LKFKKALTLSTPASRLTRNAPPXKPSQTPKLPDNK 642
L+ +K + + P+ L ++PP KP Q PKLP K
Sbjct: 117 LEPEKKVKFALPSPELPASSPPPKP-QKPKLPSQK 150
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 113 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLE 259
P++K KPE+ E + P QP+Q E +Q D PK Q++
Sbjct: 133 PEKKEEAKPEKPAEPKEPEPAQKQAEQPEQAEEKQ--ETKDAEPKEQVD 179
>AF025461-3|AAB70998.3| 632|Caenorhabditis elegans Hypothetical
protein M01D1.2a protein.
Length = 632
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = +3
Query: 180 STTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATKLHMKLVTTFRLK 359
STT+ +++D +N+ ++SD+ + V L KE + +++M+ LK
Sbjct: 464 STTVQKRIKDLDTRNKDLSSDIGTLGDVVKQLTLMNEKMEKEADQRAEVNMERELKSALK 523
Query: 360 SRXYLKTVGDNQDNTALVQQGI 425
S+ LK D + A+ + +
Sbjct: 524 SKQQLK--NDTLKSPAITDENV 543
>AF003385-5|AAB54245.1| 494|Caenorhabditis elegans Hypothetical
protein R08F11.3 protein.
Length = 494
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 211 IFLLLGLIVVEVLFKWELVFHLLFWLQRNLPLG 113
+F +L L++ + +FHLL+W +RNLP G
Sbjct: 1 MFFILVLVLTGISI---YLFHLLYWKRRNLPPG 30
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 138 QNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLK-SNWRPVPTSP 278
QNS T H N S++ SP N N S ++L S R V TSP
Sbjct: 452 QNSLKVTTVHDNTASSSSSPDNSETQNNNLSKITNLNLSIEREVSTSP 499
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 138 QNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLK-SNWRPVPTSP 278
QNS T H N S++ SP N N S ++L S R V TSP
Sbjct: 444 QNSLKVTTVHDNTASSSSSPDNSETQNNNLSKITNLNLSIEREVSTSP 491
>Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 610 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 644
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 526 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 560
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 595 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 629
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 660 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 694
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 707 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 741
>AL032647-2|CAA21689.1| 178|Caenorhabditis elegans Hypothetical
protein Y57A10B.2 protein.
Length = 178
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 159 NSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 323
++H +S T SPS+ + S +S+ K + + ++PLS S + EP+ +T+
Sbjct: 86 STHFVTSSATASPSS------SSSSSSEYKKKVKRLSSNPLSSSTSSSEPSTSTR 134
>AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 610 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 644
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 526 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 560
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 595 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 629
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 660 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 694
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 707 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 741
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 601 PXKPSQTPKLPDNKK-RKPLSITKVNTTSNN*LXR 702
P P+Q+P L ++ R+PL +T TTS++ L R
Sbjct: 470 PLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPR 504
>Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.8 protein.
Length = 191
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 135 SQNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTS 275
++ S+ K N L KTS+T +PS +Q S + +N + + S
Sbjct: 45 AKRSRKKANGELPKTSSTAAPSLVRSSRQTDSYVNGTNNNSKKLSAS 91
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +3
Query: 177 TSTTIS--PSNRNIDKQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 308
+ST IS P + + ++ S+ S L S+ PT PLSV++RN+ P
Sbjct: 467 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 514
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +3
Query: 177 TSTTIS--PSNRNIDKQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 308
+ST IS P + + ++ S+ S L S+ PT PLSV++RN+ P
Sbjct: 484 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 531
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +3
Query: 177 TSTTIS--PSNRNIDKQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 308
+ST IS P + + ++ S+ S L S+ PT PLSV++RN+ P
Sbjct: 596 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,006,697
Number of Sequences: 27780
Number of extensions: 333425
Number of successful extensions: 1455
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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