Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_E24
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   1.2  
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890...    30   2.8  
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    30   2.8  
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    29   3.7  
07_03_0139 + 14143383-14143512,14143601-14144334,14144413-141448...    29   6.5  
04_03_0732 + 19095320-19095827,19095848-19096621,19096863-190969...    29   6.5  
12_01_0801 + 7351171-7351198,7351383-7352020,7352098-7352559,735...    28   8.6  

>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = -2

Query: 131 TNIDQTRH------RPHPLPVQTRHAPVLRANP 51
           T IDQ  H      + H +PVQ  H+PVL+ NP
Sbjct: 324 TQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNP 356


>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
            8905437-8905690,8905785-8908799,8908889-8909001,
            8909975-8910164,8910399-8910512,8910591-8910698,
            8910941-8911073,8911206-8911408,8911626-8911826
          Length = 1889

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 519  GSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGK 647
            G+  PR +  D  EW N  PT+   ++ + +PRE     Q+ K
Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLK 1435


>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 543 LDDEAFGYL-KRVIVTPAVYPRLLEFLHVDIQSTG 442
           LDDE   YL  R  V   +  RLL+F++VD  STG
Sbjct: 279 LDDEDISYLTNRAAVYIEMGKRLLKFIYVDPSSTG 313


>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 101 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 12
           H L +  RH P L+A P S +    C+LPL
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136


>07_03_0139 +
           14143383-14143512,14143601-14144334,14144413-14144874,
           14144956-14145788,14145871-14146041,14146121-14146379,
           14146828-14146866,14147903-14147989
          Length = 904

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 582 VPIYYLAKPQPRERAWENQRGKXNP 656
           VP  + A P+ R R W   RGK NP
Sbjct: 246 VPAPFSAIPEQRARNWARARGKVNP 270


>04_03_0732 +
           19095320-19095827,19095848-19096621,19096863-19096906,
           19097191-19097250
          Length = 461

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 107 RPHPLPVQTRHAPVLRANPYSEVTDP 30
           RP+PL V +RHA VL    +  V DP
Sbjct: 133 RPNPLDVVSRHAGVLSRGDHCLVVDP 158


>12_01_0801 +
           7351171-7351198,7351383-7352020,7352098-7352559,
           7352641-7353105
          Length = 530

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 582 VPIYYLAKPQPRERAWENQRGKXNP 656
           VP  +L  P+ R R W   RGK NP
Sbjct: 180 VPAPFLDIPKQRARNWARARGKVNP 204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,608,546
Number of Sequences: 37544
Number of extensions: 472795
Number of successful extensions: 1328
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)