Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_E22
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...   244   6e-67
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   2.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   2.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.7  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   3.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   8.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   8.5  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score =  244 bits (598), Expect = 6e-67
 Identities = 120/133 (90%), Positives = 126/133 (94%)
 Frame = +1

Query: 91  ENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI 270
           E++PIY PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI
Sbjct: 4   EDHPIYAPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI 63

Query: 271 IAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 450
           IAIYGLVVAVLIAG L+EP  Y L+KGF+HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA
Sbjct: 64  IAIYGLVVAVLIAGGLEEPKGYTLFKGFVHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 123

Query: 451 QQPRLFVGIFLFL 489
           QQPRLFVG+ L L
Sbjct: 124 QQPRLFVGMILIL 136



 Score = 46.0 bits (104), Expect = 5e-07
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +3

Query: 477 ILILIFAEVLGLYGLIVAIYLY 542
           ILILIFAEVLGLYGLIVAIYLY
Sbjct: 133 ILILIFAEVLGLYGLIVAIYLY 154


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 5   GVSWSECVQIVITVFGTCKYSH 70
           G+SW E +QI + V    +Y H
Sbjct: 693 GLSWLERIQIALDVLEGIRYLH 714


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 5   GVSWSECVQIVITVFGTCKYSH 70
           G+SW E +QI + V    +Y H
Sbjct: 731 GLSWLERIQIALDVLEGIRYLH 752


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 306 NQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRH 208
           NQ  H    D  N  ++  ND+ H   + ++RH
Sbjct: 430 NQARHSSKSDNQN--NNQHNDQAHHSSKSNNRH 460


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 89  LKIIQSTDPSLELWGRRLLSSS 154
           + I + TDP  E W RR L  S
Sbjct: 142 MTITELTDPVKEFWERRALQIS 163


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 256 VMAGIIAIYGLVVAVLIAGALQEPANY 336
           +++G+I   GL++ VLI G++ E   +
Sbjct: 413 IVSGLIT--GLIMRVLICGSISEEQKF 437


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 229 LIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPL 342
           L++ SII   + G I +    VAV +   L+ P NY L
Sbjct: 46  LVLGSIIVGTVIGNILV---CVAVFLVRKLRRPCNYLL 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,408
Number of Sequences: 438
Number of extensions: 5417
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)