Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E16
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 128 5e-30
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 122 3e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 122 3e-28
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 122 5e-28
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 120 1e-27
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 120 1e-27
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 71 1e-12
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 71 1e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 54 1e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 54 1e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 54 2e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 54 2e-07
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 53 3e-07
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 53 3e-07
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 52 7e-07
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 52 7e-07
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 52 7e-07
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 50 3e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 49 5e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 48 7e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 46 5e-05
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 40 0.002
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 40 0.002
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 32 0.64
Z81593-9|CAB04736.2| 318|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 128 bits (309), Expect = 5e-30
Identities = 73/151 (48%), Positives = 80/151 (52%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTG L + + +
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERIN-VYYNEASGGKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXGTLXGXC*XXSIXF*T 453
GTMDSVR+GPFGQ+FRPDNFVFG+ GA NW G
Sbjct: 60 VPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL-D 118
Query: 454 XFXKEPESCXXPPGIXXXTXPSGGGPGSXXG 546
KE ESC G T GGG GS G
Sbjct: 119 VVRKEAESCDCLQGF-QMTHSLGGGTGSGMG 148
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEPG 308
EASGGKYVPRA LVDLEPG
Sbjct: 53 EASGGKYVPRACLVDLEPG 71
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 200 YHGDSDLQLERINVYY 247
Y+GDSDLQLERINVYY
Sbjct: 36 YNGDSDLQLERINVYY 51
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 122 bits (294), Expect = 3e-28
Identities = 70/151 (46%), Positives = 77/151 (50%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G L + + +
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERIN-VYYNEANGGKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXGTLXGXC*XXSIXF*T 453
GTMDSVRSGPFGQ+FRPDNFVFG+ GA NW G
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL-D 118
Query: 454 XFXKEPESCXXPPGIXXXTXPSGGGPGSXXG 546
KE E C G T GGG GS G
Sbjct: 119 VVRKEAEGCDCLQGF-QLTHSLGGGTGSGMG 148
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEPG 308
EA+GGKYVPRA+LVDLEPG
Sbjct: 53 EANGGKYVPRAVLVDLEPG 71
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 200 YHGDSDLQLERINVYY 247
Y G+SDLQLERINVYY
Sbjct: 36 YKGESDLQLERINVYY 51
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 122 bits (294), Expect = 3e-28
Identities = 69/151 (45%), Positives = 77/151 (50%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G L + + +
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERID-VYYNEANNGKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXGTLXGXC*XXSIXF*T 453
GTMDSVRSGPFGQ+FRPDNFVFG+ GA NW G
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL-D 118
Query: 454 XFXKEPESCXXPPGIXXXTXPSGGGPGSXXG 546
KE E C G T GGG GS G
Sbjct: 119 VIRKEAEGCDCLQGF-QLTHSLGGGTGSGMG 148
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEPG 308
EA+ GKYVPRA+LVDLEPG
Sbjct: 53 EANNGKYVPRAVLVDLEPG 71
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 200 YHGDSDLQLERINVYY 247
+ G++DLQLERI+VYY
Sbjct: 36 FKGETDLQLERIDVYY 51
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 122 bits (293), Expect = 5e-28
Identities = 69/151 (45%), Positives = 77/151 (50%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G L + + +
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERID-VYYNEANNGKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXGTLXGXC*XXSIXF*T 453
GTMDSVRSGPFGQ+FRPDNFVFG+ GA NW G
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL-D 118
Query: 454 XFXKEPESCXXPPGIXXXTXPSGGGPGSXXG 546
KE E C G T GGG GS G
Sbjct: 119 VIRKEAEGCDCLQGF-QLTHSLGGGTGSGMG 148
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEPG 308
EA+ GKYVPRA+LVDLEPG
Sbjct: 53 EANNGKYVPRAVLVDLEPG 71
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 200 YHGDSDLQLERINVYY 247
+ G+SDLQLERI+VYY
Sbjct: 36 FKGESDLQLERIDVYY 51
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 120 bits (289), Expect = 1e-27
Identities = 70/151 (46%), Positives = 79/151 (52%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G L + + +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERIN-VYYNEAGSNKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXGTLXGXC*XXSIXF*T 453
GTMDSVRSGPFGQ+FRPDN+VFG+ GA NW G
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL-D 118
Query: 454 XFXKEPESCXXPPGIXXXTXPSGGGPGSXXG 546
KE ES G T GGG GS G
Sbjct: 119 VVRKEAESTDCLQGF-QLTHSLGGGTGSGMG 148
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEPG 308
EA KYVPRA+LVDLEPG
Sbjct: 53 EAGSNKYVPRAVLVDLEPG 71
Score = 35.1 bits (77), Expect = 0.068
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 200 YHGDSDLQLERINVYY 247
Y GDSDLQLERINVYY
Sbjct: 36 YVGDSDLQLERINVYY 51
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 120 bits (289), Expect = 1e-27
Identities = 70/151 (46%), Positives = 79/151 (52%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G L + + +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERIN-VYYNEAGSNKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXGTLXGXC*XXSIXF*T 453
GTMDSVRSGPFGQ+FRPDN+VFG+ GA NW G
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL-D 118
Query: 454 XFXKEPESCXXPPGIXXXTXPSGGGPGSXXG 546
KE ES G T GGG GS G
Sbjct: 119 VVRKEAESTDCLQGF-QLTHSLGGGTGSGMG 148
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEPG 308
EA KYVPRA+LVDLEPG
Sbjct: 53 EAGSNKYVPRAVLVDLEPG 71
Score = 35.1 bits (77), Expect = 0.068
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 200 YHGDSDLQLERINVYY 247
Y GDSDLQLERINVYY
Sbjct: 36 YVGDSDLQLERINVYY 51
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 70.5 bits (165), Expect = 1e-12
Identities = 38/105 (36%), Positives = 54/105 (51%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G G + +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYK-GDNGSQLERITSYYKEMEGRKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+++ VRS +G++F P+N V G+ GA NW G
Sbjct: 60 VPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E G KYVPRAILVDL+P
Sbjct: 53 EMEGRKYVPRAILVDLDP 70
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 70.5 bits (165), Expect = 1e-12
Identities = 38/105 (36%), Positives = 54/105 (51%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G G + +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYK-GDNGSQLERITSYYKEMEGRKY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+++ VRS +G++F P+N V G+ GA NW G
Sbjct: 60 VPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E G KYVPRAILVDL+P
Sbjct: 53 EMEGRKYVPRAILVDLDP 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/105 (29%), Positives = 44/105 (41%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P A G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQ-QADGESFTTFFSDTGNGRY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 HRVPTMGTLTCSWSAS--MYTTX--EASGGKYVPRAILVDLEP 305
H + GT+ A +TT + G+YVPR+I VDLEP
Sbjct: 28 HGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEP 70
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 54.4 bits (125), Expect = 1e-07
Identities = 34/106 (32%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MREIV I GQ G QIG WE+ EHGI P G +P V
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 274 XXXXXXXXXXXGT-MDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
T +D VR+G + ++F P+ + GK A N+ G
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARG 106
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E GK+VPRAI VDLEP
Sbjct: 55 ETPSGKHVPRAIFVDLEP 72
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/105 (29%), Positives = 44/105 (41%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P A G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQ-QADGESFTTFFSDTGNGRY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 HRVPTMGTLTCSWSAS--MYTTX--EASGGKYVPRAILVDLEP 305
H + GT+ A +TT + G+YVPR+I VDLEP
Sbjct: 28 HGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEP 70
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/105 (28%), Positives = 44/105 (41%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 61 PRSIFVDLEPT-VVDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
+ G+YVPR+I VDLEP
Sbjct: 53 DTGNGRYVPRSIFVDLEP 70
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/105 (28%), Positives = 44/105 (41%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 61 PRSIFVDLEPT-VVDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
+ G+YVPR+I VDLEP
Sbjct: 53 DTGNGRYVPRSIFVDLEP 70
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/105 (28%), Positives = 43/105 (40%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQS-TNEGESFTTFFSDTGSGRY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 201 TMGTLTCSWSASMYTTXEASG-GKYVPRAILVDLEP 305
TM T + + S T +G G+YVPR+I VDLEP
Sbjct: 35 TMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEP 70
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/105 (28%), Positives = 43/105 (40%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQS-TNEGESFTTFFSDTGSGRY 59
Query: 274 XXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 60 VPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 201 TMGTLTCSWSASMYTTXEASG-GKYVPRAILVDLEP 305
TM T + + S T +G G+YVPR+I VDLEP
Sbjct: 35 TMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEP 70
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 274 XXXXXXXXXXXGT-MDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
T +D +R+G + +F P+ + GK A N+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E G++VPRA++VDLEP
Sbjct: 55 ETGSGRHVPRAVMVDLEP 72
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 274 XXXXXXXXXXXGT-MDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
T +D +R+G + +F P+ + GK A N+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E G++VPRA++VDLEP
Sbjct: 55 ETGSGRHVPRAVMVDLEP 72
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXX 273
MRE++ I GQ G QIG WE+ EHGI P G +P L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 274 XXXXXXXXXXXGT-MDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
T +D +R+G + +F P+ + GK A N+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E G++VPRA++VDLEP
Sbjct: 55 ETGSGRHVPRAVMVDLEP 72
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXXX 276
RE++ I GQ G QIG WE+ EHGI P G +P L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 277 XXXXXXXXXXGT-MDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
T +D +R+G + +F P+ + GK A N+ G
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E G++VPRA++VDLEP
Sbjct: 54 ETGSGRHVPRAVMVDLEP 71
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/104 (28%), Positives = 40/104 (38%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXXXXX 276
RE V I GQ G QIG WE+ EHG+D G L +
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 277 XXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G +G +F PD + GK A N+ G
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E+ GK+VPRAI VDLEP
Sbjct: 58 ESMNGKHVPRAIYVDLEP 75
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 48.4 bits (110), Expect = 7e-06
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +1
Query: 88 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLPWGL*LAVGAHQCILQXKXXXX 267
N+ RE++ I GQ G Q+G WE+ EHGI P G + L V
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 268 XXXXXXXXXXXXXGT-MDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
T +D +R+G + +F P+ + GK A N+ G
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E GK+VPRAI+VDLEP
Sbjct: 60 ETMAGKHVPRAIMVDLEP 77
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 45.6 bits (103), Expect = 5e-05
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DPTGCLPWGL*LAVGAHQCILQXKXXXX 267
MRE++ I GQ G QIG WE+ EHGI D T P G ++G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPDGNSGSLGT----FFSDTGYG 56
Query: 268 XXXXXXXXXXXXXGTMDSVRSGPFGQIFRPDNFVFGKXGAXXNWGXG 408
+D +R+G + ++F P+ + GK A N+ G
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARG 103
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 228 SASMYTTXEASG-GKYVPRAILVDLEP 305
S S+ T +G G++VPR+I VDLEP
Sbjct: 43 SGSLGTFFSDTGYGRHVPRSIFVDLEP 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
RE++ I GQ G QIG WE+ EHGI P G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG 40
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E +GGK+VPR + VDLEP
Sbjct: 61 ETAGGKHVPRCLFVDLEP 78
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 103 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
++ + GQCGNQ+ FW+ + DEHGI+ G
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERG 37
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
+A YVPRA+LVDLEP
Sbjct: 55 QADDDHYVPRAVLVDLEP 72
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 103 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 195
++ + GQCGNQ+ FW+ + DEHGI+ G
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERG 37
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
+A YVPRA+LVDLEP
Sbjct: 55 QADDDHYVPRAVLVDLEP 72
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 252 EASGGKYVPRAILVDLEP 305
E +GGK+VPR + VDLEP
Sbjct: 33 ETAGGKHVPRCLFVDLEP 50
>Z81593-9|CAB04736.2| 318|Caenorhabditis elegans Hypothetical
protein T20B3.7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 289 RMARGTYLPPEASXVVYIDALQLQVRVP 206
R A G+++PPE S V +Q Q R+P
Sbjct: 135 RRANGSFIPPEDSNVTVEIKMQAQKRIP 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,603,925
Number of Sequences: 27780
Number of extensions: 239749
Number of successful extensions: 755
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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