Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E14
(856 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 160 1e-39
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 159 3e-39
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 138 7e-33
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 132 5e-31
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 126 2e-29
10_08_0337 + 16900778-16900910,16902205-16902299,16904233-16905708 31 1.5
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 4.7
04_03_0045 + 10107994-10108076,10108289-10108529,10108571-10108789 29 4.7
04_04_0045 + 22337089-22337385,22338437-22338715,22338728-223387... 28 8.3
02_03_0288 - 17328805-17328828,17328888-17328989,17329069-173292... 28 8.3
01_01_0796 + 6190931-6192745 28 8.3
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 160 bits (388), Expect = 1e-39
Identities = 79/138 (57%), Positives = 98/138 (71%), Gaps = 1/138 (0%)
Frame = +3
Query: 417 WMALRTNPNWVLMLSLEFP*PVXXXXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGG 596
W + N +L +SL + +PLY+H+A+LAGN +VLPVPAFNVINGG
Sbjct: 107 WCKQKLGANAILAVSLA----ICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGG 162
Query: 597 SHAGNKLAMQ-EFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKXGLDSTAVGDEGGXXP 773
SHAGNKLAMQ EFMI PTGA++F EAM+MG EVYH+LK +IK+K G D+T VGDEGG P
Sbjct: 163 SHAGNKLAMQAEFMILPTGAASFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGDEGGFAP 222
Query: 774 NIQNXKDALYLIQDAIXK 827
NIQ K+ L L++ AI K
Sbjct: 223 NIQENKEGLELLKTAIEK 240
Score = 128 bits (308), Expect = 7e-30
Identities = 76/124 (61%), Positives = 88/124 (70%), Gaps = 7/124 (5%)
Frame = +2
Query: 134 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 310
I S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 311 VLTAIKNINELIAPELTKANLEVTQQRGIDELML-KLDGTEN-----KSKLGANAILGVS 472
V A+ N+N +IAP L + T Q +D M+ +LDGT+N K KLGANAIL VS
Sbjct: 64 VSKAVDNVNSVIAPAL--IGKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 473 LACC 484
LA C
Sbjct: 122 LAIC 125
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 159 bits (385), Expect = 3e-39
Identities = 72/106 (67%), Positives = 86/106 (81%)
Frame = +3
Query: 510 VPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSE 689
VPLYKH+ +LAG ++V+PVPAFNVINGGSHAGN LAMQEFM+ P GAS+FSEA+RMGSE
Sbjct: 175 VPLYKHIQELAGTKELVMPVPAFNVINGGSHAGNNLAMQEFMLLPVGASSFSEALRMGSE 234
Query: 690 VYHHLKKIIKEKXGLDSTAVGDEGGXXPNIQNXKDALYLIQDAIXK 827
VYH LK IIK K G D+ VGDEGG PN+Q+ ++ L L+ DAI K
Sbjct: 235 VYHALKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIEK 280
Score = 152 bits (369), Expect = 3e-37
Identities = 78/119 (65%), Positives = 95/119 (79%), Gaps = 1/119 (0%)
Frame = +2
Query: 131 VIKSIKARQIFDSRGNPTVEVDLVTELG-LFRAAVPSGASTGVHEALELRDNIKSEYHGK 307
V++SI+ARQI DSRGNPTVEVDLV G L R+AVPSGASTG++EALELRD + Y GK
Sbjct: 50 VVRSIRARQIVDSRGNPTVEVDLVAGDGRLHRSAVPSGASTGIYEALELRDGDGAAYGGK 109
Query: 308 GVLTAIKNINELIAPELTKANLEVTQQRGIDELMLKLDGTENKSKLGANAILGVSLACC 484
GVL A++NINE+IAP+L ++V Q +D +ML +DGT NKSKLGANAILGVSL+ C
Sbjct: 110 GVLNAVRNINEVIAPKL--VGVDVRNQSDVDAIMLDIDGTPNKSKLGANAILGVSLSVC 166
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 138 bits (333), Expect = 7e-33
Identities = 83/166 (50%), Positives = 98/166 (59%), Gaps = 29/166 (17%)
Frame = +3
Query: 417 WMALRTNPNWVLMLSLEFP*PVXXXXXXXXNVPLYK---HLADLAGNNDIVLPVPAFNVI 587
W + N +L +SL V +PLY+ H+A+LAGN +VLPVPAFNVI
Sbjct: 107 WCKQKLGANAILAVSLA----VCKAGAMVKKIPLYQKLQHIANLAGNKTLVLPVPAFNVI 162
Query: 588 NGGSHAGNKLAMQ--------------------------EFMIFPTGASTFSEAMRMGSE 689
NGGSHAGNKLAMQ EFMI PTGAS+F EAM+MG E
Sbjct: 163 NGGSHAGNKLAMQVKYCLNNKTMSMHDSVIFSAHLAAVQEFMILPTGASSFKEAMKMGVE 222
Query: 690 VYHHLKKIIKEKXGLDSTAVGDEGGXXPNIQNXKDALYLIQDAIXK 827
VYHHLK IIK+K G D+T VGDEGG PNIQ K+ L L++ AI K
Sbjct: 223 VYHHLKSIIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKAAIAK 268
Score = 128 bits (310), Expect = 4e-30
Identities = 75/128 (58%), Positives = 90/128 (70%), Gaps = 7/128 (5%)
Frame = +2
Query: 122 LKMVIKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEY 298
+ + I+S+KARQIFDSRGNPTVEVD+ G F R AVPSGASTG++EALELRD S+Y
Sbjct: 1 MAVTIQSVKARQIFDSRGNPTVEVDVGLSDGSFARGAVPSGASTGIYEALELRDG-GSDY 59
Query: 299 HGKGVLTAIKNINELIAPELTKANLEVTQQRGIDELML-KLDGTEN-----KSKLGANAI 460
GKGVL A+ N+N +I P L + T+Q ID M+ +LDGT N K KLGANAI
Sbjct: 60 LGKGVLKAVSNVNTIIGPAL--IGKDPTEQVDIDNFMVQQLDGTSNNWGWCKQKLGANAI 117
Query: 461 LGVSLACC 484
L VSLA C
Sbjct: 118 LAVSLAVC 125
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 132 bits (318), Expect = 5e-31
Identities = 77/124 (62%), Positives = 90/124 (72%), Gaps = 7/124 (5%)
Frame = +2
Query: 134 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 310
I+S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IQSVKARQIFDSRGNPTVEVDICCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 311 VLTAIKNINELIAPELTKANLEVTQQRGIDELML-KLDGTEN-----KSKLGANAILGVS 472
VL A+ N+N +I P L + T+Q ID M+ +LDGT+N K KLGANAIL VS
Sbjct: 64 VLKAVDNVNSIIGPAL--IGKDPTEQTVIDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 473 LACC 484
LA C
Sbjct: 122 LALC 125
Score = 95.5 bits (227), Expect = 5e-20
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +3
Query: 624 QEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKXGLDSTAVGDEGGXXPNIQNXKDALY 803
QEFMI PTGAS+F EAM+MG EVYH+LK +IK+K G D+T VGDEGG PNIQ K+ L
Sbjct: 138 QEFMILPTGASSFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLE 197
Query: 804 LIQDAIXK 827
L++ AI K
Sbjct: 198 LLKTAIEK 205
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 126 bits (304), Expect = 2e-29
Identities = 56/90 (62%), Positives = 66/90 (73%)
Frame = +3
Query: 510 VPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSE 689
VPLYKH+A+L G + LP+PA VINGG+HAGN L +QE MI P GA F EAM+MGSE
Sbjct: 170 VPLYKHIAELVGKSATTLPIPAITVINGGTHAGNSLPIQEIMILPVGAKNFEEAMQMGSE 229
Query: 690 VYHHLKKIIKEKXGLDSTAVGDEGGXXPNI 779
YHHLK II EK G +S +GD+GG PNI
Sbjct: 230 TYHHLKDIILEKYGSNSCNIGDDGGFAPNI 259
Score = 75.8 bits (178), Expect = 4e-14
Identities = 45/140 (32%), Positives = 78/140 (55%)
Frame = +2
Query: 89 ISLNLRKSSSVLKMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEAL 268
IS ++R+++ VI S++ARQI D RG P VEV L T + RA+ + + A
Sbjct: 35 ISNHMRRAAPA---VITSVRARQILDGRGEPAVEVSLHTNKAVHRASAAAADAPEGAAAD 91
Query: 269 ELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQRGIDELMLKLDGTENKSKLG 448
+RD K + + V A++ IN+ ++ L ++ QQ ID+ ++ LD +K+++G
Sbjct: 92 AVRDAEKRKLLARAVADAVRVINDKVSEAL--VGMDPQQQSQIDQAIMDLDKAHHKAEIG 149
Query: 449 ANAILGVSLACC*GWCCQEE 508
N++L VS+A C ++E
Sbjct: 150 VNSMLAVSIAACKAGAAEKE 169
>10_08_0337 + 16900778-16900910,16902205-16902299,16904233-16905708
Length = 567
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/86 (33%), Positives = 39/86 (45%)
Frame = -1
Query: 703 KWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPPLITLNAGTGRTMSLFPAKSAKC 524
K W+ S+P A + A G + +A P+ PP G G T ++ A
Sbjct: 61 KCWFDSDP---AEKQFKA--GGMSLLTLAVSVPSLKPP----KCGAG-TADPGCSEKASS 110
Query: 523 LYSGTFFLAAPALATG*GNSKDSIST 446
L G FFLA LA G G +K +IST
Sbjct: 111 LQLGVFFLALYILAVGTGGTKPNIST 136
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 212 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPE 355
GL +A + SGA + A+E D+ YHG V +++N +IA +
Sbjct: 1124 GLVKAFMDSGAKAVISSAMEPPDSQSIVYHGMEVNGSLENGKFVIADD 1171
>04_03_0045 + 10107994-10108076,10108289-10108529,10108571-10108789
Length = 180
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +2
Query: 221 RAAVPSGASTGVHEALELR--DNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQR- 391
R A P+ ++ L L D + + G +++ +LI L+ Q +
Sbjct: 46 RVAHPAEFLQRINNGLTLSSWDQLDAAAGGAPFSKMVRDTTDLIEKRLSNMGWSEKQHKP 105
Query: 392 --GIDELMLKLDGTENKSKLGANAILGVSLAC 481
+D LM +LD E +K G LG +AC
Sbjct: 106 VNALDLLMKRLDNNEKDAKQGTIKALGSHMAC 137
>04_04_0045 +
22337089-22337385,22338437-22338715,22338728-22338798,
22338883-22338926,22340670-22340884,22340958-22341082,
22341142-22341220,22341278-22341367
Length = 399
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 457 SISTQFGFVLSAIQLKHEFIN--PSLLGYFEVGFCKFRSNEF 338
SIS+ FG +L + F P+LLGY G CKF EF
Sbjct: 107 SISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEF 148
>02_03_0288 -
17328805-17328828,17328888-17328989,17329069-17329239,
17329471-17329572,17331257-17331387,17335329-17335460,
17335616-17335792,17335897-17336077
Length = 339
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 573 LVQVEQCHYFQPNQPSACTAEHSSWQHQP*QQARETPRIALAPSLD-LFSVPSNLSMSSS 397
L+ E C QPN P AC + ++ + + A + LD L P N+ M+++
Sbjct: 270 LIDAEACRMMQPNWPEACYRQGAA------LMLLKDYKNACSSFLDGLKLEPENVKMNNA 323
Query: 396 IPLCWVTSRLAFVSS 352
+ LC V ++ + +
Sbjct: 324 LRLCLVQRKVDVIEN 338
>01_01_0796 + 6190931-6192745
Length = 604
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 212 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLE 376
GLF+ A TG A+ + D +S++H G T ++ ++ ++ +A E
Sbjct: 29 GLFKCASDLSILTGASVAVVIEDQNRSKFHAVGTPTVQAVVDAALSSDVEEAAAE 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,533,985
Number of Sequences: 37544
Number of extensions: 487562
Number of successful extensions: 1105
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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