Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E12
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.011
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.95
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 8.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 8.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.008
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +1
Query: 451 KKTPPPPPXXXXWGGGGGKKKXXXXLGGGXXXPPPPXXXGGGGGGGXXPXPPXXSPXXXX 630
KK PPPPP GK PPPP G P PP
Sbjct: 308 KKRPPPPPPPSR--RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS--IPLPP-----QGR 358
Query: 631 XXPPPPPP 654
PPPPPP
Sbjct: 359 SAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 588 PPPPXPPXXXGGGGXXXPPPQXXXXFFFPPPPXP 487
PPPP PP G PP PPPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSA----PPPPPP 366
Score = 29.9 bits (64), Expect = 0.41
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Frame = +3
Query: 411 PXPP----RGXPPXXXXKKN---PPPPPXXXXXGXGGGEKKKXPXXGGGGXXPPPP 557
P PP RG PP N PPPPP G P G PPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS---IPLPPQGRSAPPPPPP 366
Score = 29.5 bits (63), Expect = 0.54
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 526 LGGGXXXPPPPXXXGGGGGGGXXPXPPXXSPXXXXXXPPPPPPXXXXXXXXXXXXXXXXX 705
L PPPP G PP + PPPPPP
Sbjct: 304 LAANKKRPPPPPPPSRRNRG----KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRS 359
Query: 706 XXPPXPP 726
PP PP
Sbjct: 360 APPPPPP 366
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 460 PPPPPXXXXWGGGGGKKKXXXXLGGGXXXPPPPXXXGGGGGGGXXPXPPXXSPXXXXXXP 639
PPPPP G G PPPP G PP S P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQ-----GRSAPPPPPPRSAPSTG---RQPPPLSSSRAVSNP 388
Query: 640 PPPPP 654
P PPP
Sbjct: 389 PAPPP 393
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 597 GGXPPPPXPPXXXGGGGXXXPPPQXXXXFFFPPPPXP 487
G PPP PP G PP PP P P
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.5 bits (58), Expect = 2.2
Identities = 35/146 (23%), Positives = 35/146 (23%), Gaps = 12/146 (8%)
Frame = +3
Query: 324 PPKKKXXXVLXPXXPPXPXFLVGXGGG--SXPXPPRGXPPXXXX-------KKNPPPPPX 476
PP P PP P V S PP P KK PPPPP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 477 XXXXGXGGGEKKKXPXXGGGGXXPPPPXKXXXXXXXXXXXXXXXXFXKXXXXXPPPPPP- 653
G K PPPP PPPPPP
Sbjct: 317 PSRRNRG---KPPIGNGSSNSSLPPPP------PPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 654 --XXXXXXXXXXXXXXXXXXPPPPPP 725
PP PPP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 588 PPPPXPPXXXGGGGXXXPPPQXXXXFFFPPPPXPXXXXXGG 466
PPPP PP G P PPPP P G
Sbjct: 311 PPPPPPPSRRNRG--KPPIGNGSSNSSLPPPPPPPRSNAAG 349
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.011
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 597 GGXPPPPXPPXXXGGGGXXXPPP 529
GG PPPP PP G G PPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.3 bits (75), Expect = 0.019
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -2
Query: 588 PPPPXPPXXXGGGGXXXPPPQXXXXFFFPPPPXPXXXXXGGGGGFF 451
P P PP GG PPP PPPP P GG ++
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Score = 31.9 bits (69), Expect = 0.10
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 642 GGXPXXXXWXXXGGXGGXPPPPXPPXXXGGGG-XXXPPPQ 526
GG P G G PPPP PP GG P PQ
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQ 798
Score = 31.5 bits (68), Expect = 0.13
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Frame = +1
Query: 454 KTPPPPPXXXXWGGGGGKK---KXXXXLGGGXXXPPPPXXXGGGGGGGXXPXPPXXSPXX 624
K+PPPPP + GG PPPP G G P PP S
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 625 XXXXPPPP 648
P P
Sbjct: 790 SRYYAPAP 797
Score = 30.7 bits (66), Expect = 0.24
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +3
Query: 324 PPKKKXXXVLXPXXPPXPXFLVGXGGGSXPXPPRGXPPXXXXKKNPPPPPXXXXXGXGGG 503
PP V P P P G P PP PP PPPPP GG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP---PPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 504 EKKKXP 521
+ P
Sbjct: 790 SRYYAP 795
Score = 30.7 bits (66), Expect = 0.24
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 548 PPPPKXXGGXGGGGXPPXPPXXXQXXXXGXPPPPP 652
PPP GG PP PP G PPPPP
Sbjct: 752 PPPAPIMGG------PPPPPPPPGVAGAGPPPPPP 780
Score = 30.3 bits (65), Expect = 0.31
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = +1
Query: 418 PPXXXPXXFXXKKTPPP---PPXXXXWGGGGGKKKXXXXLGGGXXXPPPPXXXGGGGGGG 588
PP P P P PP GG G G PPPP GG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 589 XXPXPPXXSP 618
P P
Sbjct: 792 YYAPAPQAEP 801
Score = 29.9 bits (64), Expect = 0.41
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 547 PPPPXXXGGGGGGGXXPXPPXXSPXXXXXXPPPPPP 654
PPPP P PP +P PPPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPP-APIMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.54
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 411 PXPPRGXPPXXXXKKNPPPPPXXXXXGXGGGEKKKXPXXGGGGXXPPPP 557
P PP P P PPP GG P G G PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIM----GGPPPPPPPPGVAGAGPPPP 778
Score = 29.1 bits (62), Expect = 0.72
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 583 GGXXPXPPXXSPXXXXXXPPPPPP 654
GG P PP PPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 0.95
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 551 PPPKXXGGXGGGGXPPXPPXXXQXXXXGXPPPPP 652
PPP GG PP PP PPPPP
Sbjct: 752 PPPAPI--MGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 580 GGGXXPXPPXXSPXXXXXXPPPPPP 654
GG P PP PPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 0.95
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = -1
Query: 553 GGGXXPPPPXXGXFFFSPPPXPXXLXXGGGGGFFXXXXXGGXPRGGLGXXPPPXPTKKXG 374
GGG PPP G F GG GGF GG G P G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 373 XGGXXGXKTXXXFFXGGP 320
GG G GGP
Sbjct: 254 FGGGPGGFGGGPGGHGGP 271
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 488 GXGGGGKKKXXXXWGGGXXXPPP-PKXXGGXGGGG 589
G GGG +GGG PPP P GG GG G
Sbjct: 184 GHNGGG----FGGFGGGSGGPPPGPGGFGGFGGFG 214
Score = 27.1 bits (57), Expect = 2.9
Identities = 27/84 (32%), Positives = 27/84 (32%)
Frame = -2
Query: 606 GGXGGXPPPPXPPXXXGGGGXXXPPPQXXXXFFFPPPPXPXXXXXGGGGGFFXXKXXGGX 427
GG GG PPP P G GG F P GG GG GG
Sbjct: 195 GGSGG--PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG-----GPGGF 247
Query: 426 XGGXWXXXPXPXXPKXGGXGXXPG 355
GG P GG G PG
Sbjct: 248 GGGLGGFGGGP-----GGFGGGPG 266
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 460 PPPPPXXXXWGGGGGKKKXXXXLGGGXXXPPPPXXXGGGGGGG 588
PP P +GG GG+ GG P GG GGG
Sbjct: 201 PPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 402 GSXPXPPRGXPPXXXXKKNPPPPPXXXXXGXGGGEKKKXPXXGG 533
G+ P PP PP PPPPP G K K P G
Sbjct: 7 GNPPPPP--PPPGFEPPSQPPPPP---PPGYVKKRKNKTPAQSG 45
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 581 GGGXPPXPPXXXQXXXXGXPPPPP 652
G PP PP + PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 419 PPXXPPXXXXXKKPPPPP 472
PP PP +PPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 597 GGXPPPPXPPXXXGGGGXXXPPP 529
G PPPP PP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 586 GXXPXPPXXSPXXXXXXPPPPPP 654
G P PP PPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 583 GGXXPXPPXXSPXXXXXXPPPPPP 654
G P PP PPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 357 PXXPPXPXFLVGXGGGSXPXPPRGXPPXXXXKKNPPPP 470
P PP L G S P P P ++ PPPP
Sbjct: 105 PSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPP 142
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 595 PXPPXXSPXXXXXXPPPPPP 654
P PP +P PPPPP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPP 748
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 588 PPPPXPPXXXGGGGXXXPP 532
PPPP PP GG P
Sbjct: 947 PPPPPPPLVSAAGGKFVSP 965
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,206,023
Number of Sequences: 5004
Number of extensions: 47382
Number of successful extensions: 412
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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