Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_E10
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0122 - 21025469-21026719                                         30   2.8  
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349...    29   3.7  
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238...    29   3.7  
02_05_1305 - 35586499-35586601,35586963-35587034,35587111-355872...    29   4.9  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    28   8.6  
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609...    28   8.6  

>03_05_0122 - 21025469-21026719
          Length = 416

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 448 PHVADDPHIYVTKLIPGGAAAASQLLINDAILQV 549
           P  A  P + V ++IPG AAA + LL  D IL V
Sbjct: 172 PVQAQLPGVLVPEVIPGSAAARAGLLPGDVILSV 205


>10_08_0289 +
           16534063-16534100,16534219-16534243,16534847-16534978,
           16535255-16535441,16536014-16536189,16536282-16536377,
           16536511-16536615,16536654-16536683,16536698-16536784,
           16536874-16536963,16537033-16537113,16537200-16537268,
           16537413-16537490,16537578-16537673,16537981-16538080,
           16538208-16538311,16538396-16538501,16538595-16538673,
           16538861-16538963
          Length = 593

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +1

Query: 490 IPGGAAAASQLLINDAILQVNDVNVENVTHAEAVDALKKAGSTVRLKVRRRAIEDTLNVS 669
           I   A     +++   + Q N     +    E VD +K AG    LKV R A+ D  +VS
Sbjct: 504 IASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVK-AGIIDPLKVIRTALVDAASVS 562

Query: 670 QVSNKEESVEIELIK 714
            +    ES+ +E+ K
Sbjct: 563 SLMTTTESIIVEIPK 577


>03_01_0305 -
           2383187-2383298,2383606-2383684,2383762-2383867,
           2383941-2384044,2384141-2384240,2384533-2384628,
           2384724-2384801,2385355-2385423,2385511-2385591,
           2385670-2385759,2385859-2385945,2386022-2386126,
           2386591-2386686,2386796-2386971,2387225-2387384,
           2387898-2388029,2388236-2388260,2389023-2389174
          Length = 615

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +1

Query: 490 IPGGAAAASQLLINDAILQVNDVNVENVTHAEAVDALKKAGSTVRLKVRRRAIEDTLNVS 669
           I   A     ++I   + Q N     +    E VD +K +G    LKV R A+ D  +VS
Sbjct: 523 IASNAGVEGSVIIGKLLEQDNTDLGYDAAKGEYVDMVK-SGIIDPLKVIRTALVDAASVS 581

Query: 670 QVSNKEESVEIELIK 714
            +    ES+ +E+ K
Sbjct: 582 SLMTTTESIIVEIPK 596


>02_05_1305 -
           35586499-35586601,35586963-35587034,35587111-35587232,
           35587767-35587826,35587919-35587997,35588219-35588307,
           35588405-35588492,35591761-35591821,35592546-35592890,
           35593094-35594351
          Length = 758

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 484 KLIPGGAAAASQLLINDAILQVNDVNVENVTHAEAVDALKKAGS-TVRLKVRRRAIEDTL 660
           KL   G      +L+N+  +    V  ++VT    ++A  K G  T  LKV+RR +E  L
Sbjct: 329 KLCEDGKMKEVNVLLNE--MDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGL 386

Query: 661 NVSQVSNK 684
            + Q + K
Sbjct: 387 QLDQFTYK 394


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 97  VDTSVTNNACSVHSVVWTP 153
           V +S+  N CS++ V+WTP
Sbjct: 147 VHSSINKNRCSINRVLWTP 165


>01_03_0050 +
           11959421-11959736,11959892-11959960,11960641-11960979,
           11961090-11961152,11962472-11962962,11963773-11964441
          Length = 648

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 523 LINDAILQVNDVNVENVTHAEAVDALKKAGSTVRLKVRRRAIEDTLNVSQVSNKEE 690
           LIN        VN+ N + +E+  + K   ++   + +RR +E+T+N S    K E
Sbjct: 180 LINKGKELQQAVNMTNGSRSESAQSSKSRENSCMERRKRRRLEETVNTSLYIKKHE 235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,673,122
Number of Sequences: 37544
Number of extensions: 329709
Number of successful extensions: 746
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)