Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E09
(856 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 117 1e-26
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 117 1e-26
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 117 1e-26
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 86 4e-17
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 50 3e-06
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 50 3e-06
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 49 4e-06
12_02_1183 - 26764883-26765174,26765559-26765677 45 9e-05
12_02_1184 + 26785739-26786113 43 3e-04
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 40 0.003
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 23 9.6
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 117 bits (281), Expect = 1e-26
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +1
Query: 130 GIKXVEVIXPYCXILPEIAXPXRXIQFRXKVXWTAXT*XIY*VCCQIPLSGIMSSDSADP 309
G + + ++ P+ LPE+ R I FR KV +T + I+ VC Q+PL GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 310 FYXIXVILASNRGTLLELGISPIVXSGLIMHLXAGAKXXELGDT-PXDXXXXNGAXK*XG 486
FY + VILASNRGT++ELGI+PIV SG++M L G+K E+ ++ D NGA K G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 487 MVIPVGXAI 513
++I +G A+
Sbjct: 124 ILIAIGEAV 132
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/54 (59%), Positives = 36/54 (66%)
Frame = +2
Query: 557 GAGXCLLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKALH 718
G G +LI + L AG+IV L E LQKGYG G GISLFIATNIC +V LH
Sbjct: 147 GTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICLLLVNLLLH 200
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 117 bits (281), Expect = 1e-26
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +1
Query: 130 GIKXVEVIXPYCXILPEIAXPXRXIQFRXKVXWTAXT*XIY*VCCQIPLSGIMSSDSADP 309
G + + ++ P+ LPE+ R I FR KV +T + I+ VC Q+PL GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 310 FYXIXVILASNRGTLLELGISPIVXSGLIMHLXAGAKXXELGDT-PXDXXXXNGAXK*XG 486
FY + VILASNRGT++ELGI+PIV SG++M L G+K E+ ++ D NGA K G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 487 MVIPVGXAI 513
++I +G A+
Sbjct: 124 ILIAIGEAV 132
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/54 (59%), Positives = 36/54 (66%)
Frame = +2
Query: 557 GAGXCLLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKALH 718
G G +LI + L AG+IV L E LQKGYG G GISLFIATNIC +V LH
Sbjct: 147 GTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICLLLVNLLLH 200
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 117 bits (281), Expect = 1e-26
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +1
Query: 130 GIKXVEVIXPYCXILPEIAXPXRXIQFRXKVXWTAXT*XIY*VCCQIPLSGIMSSDSADP 309
G + + ++ P+ LPE+ R I FR KV +T + I+ VC Q+PL GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 310 FYXIXVILASNRGTLLELGISPIVXSGLIMHLXAGAKXXELGDT-PXDXXXXNGAXK*XG 486
FY + VILASNRGT++ELGI+PIV SG++M L G+K E+ ++ D NGA K G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 487 MVIPVGXAI 513
++I +G A+
Sbjct: 124 ILIAIGEAV 132
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = +2
Query: 557 GAGXCLLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKA 712
G G +LI + L AG+IV L E LQKGYG G GISLFIATNICE I+WKA
Sbjct: 147 GTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKA 198
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 85.8 bits (203), Expect = 4e-17
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Frame = +1
Query: 112 ATKLKMGIKXVEVIXPYCXILPEIAXPX-RXIQFRXKVXWTAXT*XIY*VCCQIPLSGI- 285
A + + ++++ P+ +LPE+ P R + FR K+ TA + C Q+PL G+
Sbjct: 2 AGRSSSSFRLLDLVRPFMPLLPEVREPDGRRVPFRRKLACTAAALFAFLACSQLPLYGLH 61
Query: 286 ---MSSDSADPFYXIXVILASNRGTLLELGISPIVXSGLIMHLXAGAKXXEL-GDTPXDX 453
+ ADPFY + ILASNRGT++ELGI+P+V +G ++ L G+ P D
Sbjct: 62 RAAAAGGGADPFYWVRAILASNRGTVMELGITPVVTAGTLVQLLVGSNLVRADSSNPDDR 121
Query: 454 XXXNGAXK*XGMVIPVGXA 510
+ A K +VI G A
Sbjct: 122 ALLSAAQKLLSIVITAGEA 140
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2
Query: 557 GAGXCLLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKAL 715
GAG +L+ + L + G++ L E LQKGYG G GISLF A N CE +V +AL
Sbjct: 156 GAGNAVLVVLQLVLGGMVAIFLDELLQKGYGFGSGISLFTAANTCEGVVTRAL 208
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +2
Query: 572 LLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKALHH 721
L+ L GLI L + L+KGYG G+SLF A N C I WKAL+H
Sbjct: 43 LVFVFQLIAGGLIAIYLDDLLRKGYGFLSGLSLFSAANCCACIFWKALNH 92
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 572 LLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKA 712
+LI + + + +IV L + L+KGYG GISLF ATNIC I+WKA
Sbjct: 145 VLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICVNILWKA 191
Score = 46.4 bits (105), Expect = 3e-05
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Frame = +1
Query: 169 ILPEIAXPXRXIQFRXKVXWTAXT*XIY*VCCQIPLSGIMSSDSA---DPFYXIXVILAS 339
++PE+ P + I R K +TA I+ Q+ L GI DP + + +ILAS
Sbjct: 13 LVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILAS 72
Query: 340 NRGTLLELGISPIVXSGLIMHLXAGAKXXELG-DTPXDXXXXNGAXK*XGMVIPVGXAI 513
+R TLL GI I+ +++ + K L P N A + G+++ + A+
Sbjct: 73 SRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 557 GAGXCLLIXIXLXVAGLIVXLLXEWLQKGYG*GXGISLFIATNICETIVWKA 712
G L++ L + G+I L E LQKGYG G+SLF A N C I WKA
Sbjct: 133 GTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSLFAAANCCACIFWKA 184
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 202 IQFRXKVXWTAXT*XIY*VCCQIPLSGIMS----SDSADPFYXIXVILASNRGTLLELGI 369
+ FR K +TA + ++ V Q+PL G+ D DP Y + + AS+ TL+ LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 370 SPIVXSGLIMHL 405
P++ S + + +
Sbjct: 75 IPLLLSEMAVRI 86
>12_02_1183 - 26764883-26765174,26765559-26765677
Length = 136
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 202 IQFRXKVXWTAXT*XIY*VCCQIPLSGIMS----SDSADPFYXIXVILASNRGTLLELGI 369
+ FR K +TA + ++ V Q+PL G+ D DP Y + + AS+ TL+ LGI
Sbjct: 48 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 107
Query: 370 SPIVXSGLIMHL 405
P++ S + + +
Sbjct: 108 IPLLLSEMAVRI 119
>12_02_1184 + 26785739-26786113
Length = 124
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +1
Query: 202 IQFRXKVXWTAXT*XIY*VCCQIPLSGIMS---SDSADPFYXIXVILASNRGTLLELGIS 372
+ FR KV +TA + ++ V ++ L G+ + DP Y + + AS R T++ LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 373 PIVXSGLIMHLXAGAKXXELGD 438
P++ S +++HL K + D
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHD 114
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 268 IPLSGIMSSDSADPFYXIXVILASNRGTLLELGISPIVXSGLIMHLXA 411
+PL DP + +LA+ RGT++ELG++P+V S +++ L A
Sbjct: 61 VPLYAGAGDADPDPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLA 108
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 557 GAGXCLLIXIXLXVAGLIVXLLXEWLQKGYG*G--XGISLFIATNICETIV 703
GAG L+ + L G++V L + GYG SL IATN CE V
Sbjct: 154 GAGNAALVVLQLFAGGVVVVLADLLHETGYGVEGVSAASLLIATNACERAV 204
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 660 PXPYPYPFWSHSS 622
P PYPYPF S S
Sbjct: 252 PWPYPYPFPSWPS 264
Score = 23.0 bits (47), Expect(2) = 9.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 666 EIPXPYPYPF 637
E+P P+PYP+
Sbjct: 248 EVPYPWPYPY 257
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,233,916
Number of Sequences: 37544
Number of extensions: 227752
Number of successful extensions: 327
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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