Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E08
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 101 6e-22
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 101 7e-22
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 45 9e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 1e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 41 0.001
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.010
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.17
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.51
07_03_0803 - 21620754-21620955,21621718-21621780,21622172-216222... 31 1.2
04_04_0223 - 23723055-23723223,23723316-23723424,23723588-237236... 30 2.1
06_01_0611 + 4420873-4422207 30 2.7
04_04_0224 - 23738105-23738273,23738364-23738472,23738702-237388... 30 2.7
10_08_0710 + 20070655-20070990,20071074-20071469 29 3.6
11_06_0584 - 25220371-25222917 29 6.3
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 6.3
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912... 29 6.3
02_04_0633 - 24616563-24617279 29 6.3
01_01_0735 + 5730783-5733320 29 6.3
02_03_0179 + 16025962-16026143,16026570-16026684,16026852-160270... 28 8.3
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 101 bits (243), Expect = 6e-22
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Frame = +2
Query: 11 PKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKV 190
P P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+
Sbjct: 19 PAAPVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKI 78
Query: 191 PAFESADGKVLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAW 358
P E+ +G V ESNAIA YVA N SL G L + + QW +S +E+ W
Sbjct: 79 PVLETPEGAVF--ESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRW 136
Query: 359 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 475
++P LG + E A + L +L L+ HL + T+L
Sbjct: 137 LYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYL 175
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 474 LVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 653
LV +TLAD+++ L + F +L S S +V+R+F T+ +QP V+G
Sbjct: 175 LVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAE 234
Query: 654 APP 662
+ P
Sbjct: 235 SVP 237
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 101 bits (242), Expect = 7e-22
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Frame = +2
Query: 38 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 218 VLLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAW 358
V ESNAIA YV + S L G L A + QW +S +E+ + W
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 359 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 475
+FP LG + + E A + L +L L+ HL + T+L
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 721
Score = 95.5 bits (227), Expect = 5e-20
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 13/159 (8%)
Frame = +2
Query: 38 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 218 VLLTESNAIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAW 358
V ESNAIA YV A+ L G L A + QW +S +E+ W
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKW 121
Query: 359 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 475
++P LGI + + E A + L +L L+ HL + T+L
Sbjct: 122 LYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 160
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 474 LVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 653
LV +TLAD+++ L F ++ S S +V+R+F T+ +QP V+G +
Sbjct: 160 LVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAE 219
Query: 654 APP 662
+ P
Sbjct: 220 SVP 222
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 474 LVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 653
LV +TLAD+++ L F ++ + S +V+R+F T+ +QP V+G +
Sbjct: 721 LVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMGDVKQAD 780
Query: 654 APP 662
+ P
Sbjct: 781 SVP 783
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 44.8 bits (101), Expect = 9e-05
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +2
Query: 80 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 256
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 257 AN-----ESLRGGDLATQARVWQW 313
+ LR G+L A V W
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMW 98
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 44.4 bits (100), Expect = 1e-04
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +2
Query: 74 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 250
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 251 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 391
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 392 KQNVERAKSDLLAALKVLDGHLLTRTFL 475
+Q V + L L+ + L +L
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYL 160
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Frame = +2
Query: 26 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 205
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 206 ADGKVLLTESNAIAYYV----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 364
DG + L ES AI+ Y+ ++ LR +L+ A V W S A +F
Sbjct: 60 -DGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIF 115
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.9 bits (84), Expect = 0.010
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +2
Query: 74 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 250
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 251 YVANES--------LRGGDLATQARVWQW 313
Y+ + LR GD + A V W
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAW 102
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 146 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 301
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.51
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 41 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 218 VLLTESNAIAYYVANE 265
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>07_03_0803 -
21620754-21620955,21621718-21621780,21622172-21622250,
21623312-21623424,21623500-21623798
Length = 251
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 662 RRSRTERERADDGRHLRLVGD--GQEPTLN--VYQRRTDARV*HVLESMQQCTEDNDIGK 495
R R R +G H RLV D Q+P + ++ R DA L +Q+CT I
Sbjct: 64 RGERKSLNRNHEGGHQRLVKDYFSQDPIYSDKQFRARRDASSRQGLSPLQKCTAAIRILA 123
Query: 494 CDSLGN 477
C SLG+
Sbjct: 124 CGSLGD 129
>04_04_0223 -
23723055-23723223,23723316-23723424,23723588-23723690,
23723781-23723812,23724024-23724241,23724322-23724437,
23725055-23725310,23725719-23725806,23725928-23726005,
23726199-23726274,23726525-23726583,23727715-23728066
Length = 551
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +2
Query: 5 GFPKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKS 154
G P P A+ LY YP+ FR + Y V + N V NK+
Sbjct: 419 GIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKT 468
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2
Query: 563 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 652
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>04_04_0224 -
23738105-23738273,23738364-23738472,23738702-23738804,
23738895-23738926,23739342-23739592,23739639-23739754,
23740271-23740526,23740760-23740847,23740985-23741062,
23741238-23741313,23741532-23741590,23742639-23742711
Length = 469
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 5 GFPKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKS 154
G P P A+ LY YP+ FR + Y + + N V NK+
Sbjct: 337 GIPIGPQAASPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKT 386
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 3.6
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 146 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 307
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 308 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 448
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>11_06_0584 - 25220371-25222917
Length = 848
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 414 FARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 322
+ +ST C C +PR K +AG S+++D
Sbjct: 408 WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 161 FLKKFPAGKVPAFESADGK 217
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>03_05_1139 -
30689514-30689609,30689795-30689956,30691245-30691299,
30691695-30691959,30692749-30692959,30693542-30693721,
30693802-30693899,30694211-30694277,30694897-30694963,
30695335-30695447,30695988-30696032,30696116-30696223,
30696582-30696791,30697464-30697670,30697786-30697875,
30698168-30698389
Length = 731
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/70 (18%), Positives = 34/70 (48%)
Frame = -2
Query: 218 PFHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYKRGSFPDKCKV 39
PF + + R++T + R + + +S++++ ++RR Y + PD +
Sbjct: 665 PFGHDQTQERILREDTIINARRV----EFPSKPAVSNEAKELIRRCLTYNQAERPDVLTI 720
Query: 38 PRPPWLEFSE 9
+ P+L +++
Sbjct: 721 AQEPYLSYAK 730
>02_04_0633 - 24616563-24617279
Length = 238
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 237 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYC 341
MP+ TT+ M+ S + W P+ G HG+ N+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHGV--NWC 33
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 121 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 222
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>02_03_0179 +
16025962-16026143,16026570-16026684,16026852-16027065,
16027346-16027397,16027411-16027696
Length = 282
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 660 EEPHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSGLARAGKHAA 523
++PHR A R+P A+G G A R+S + + R HAA
Sbjct: 32 QQPHRP-APLRQPLAASGHCGGGRGARRVSRSRSSAAHPRGRLHAA 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,658,851
Number of Sequences: 37544
Number of extensions: 531198
Number of successful extensions: 1731
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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