Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E06
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0525 + 3952095-3952217,3953131-3953614,3953695-3953750,395... 33 0.40
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 33 0.40
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 31 1.2
05_04_0454 + 21383068-21384525 31 1.2
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 31 1.6
02_05_0213 + 26815889-26816475,26817718-26817788,26817985-268180... 31 1.6
11_06_0593 + 25344818-25346083,25346164-25346182,25346285-25347558 30 2.1
07_01_0934 + 7870920-7871454,7871533-7872413,7873313-7873414 29 5.0
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 29 5.0
02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385 29 5.0
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 29 5.0
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 29 6.6
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 29 6.6
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175 28 8.7
07_03_0345 + 16999633-16999848,17000090-17000116 28 8.7
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 28 8.7
03_02_0431 - 8384259-8384266,8384649-8384787,8385875-8386067,838... 28 8.7
>03_01_0525 +
3952095-3952217,3953131-3953614,3953695-3953750,
3953942-3954018,3954862-3954958,3955274-3955407,
3955760-3955825,3955954-3956044
Length = 375
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +3
Query: 342 PLWN*RLKLSPQRWKKRKGNG-----NGPELLARNTWL 440
P+W+ +L+ PQ WK+R+ N +G +L R+ WL
Sbjct: 329 PIWHQQLEAMPQEWKRRRLNASYIAVHGRAMLGRSLWL 366
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 32.7 bits (71), Expect = 0.40
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +2
Query: 401 WKRARTTRTEYLADV-EDVQAWIRKAELTARDRTLPPEPYRERL--VATRSEVPNIADRV 571
WK+ E LA + ED+ R ELT T + RE L V R+E IA
Sbjct: 366 WKKKAAASEEKLAALQEDMDGLKRNRELT---ETRVIQALREELATVERRAEEERIAHNA 422
Query: 572 ERLTRNARAIVEGSRDASERQLVQSTVTALSDQFASVCSELEARQAXVEDAC 727
++ R VE A E + + +DQ +S ELE + A +E C
Sbjct: 423 TKMAAVERE-VELEHRAVEASNALARIQRAADQSSSRAMELEHKVAVLEVEC 473
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 481 DSARSHSATGAVQRTPGGHQVRGAKHCRSRRAFDTQRSRHRGRKP*CKRETTSPIHSHGS 660
D +RS S + R GG++ +H RSR + QR R R R+ P H + S
Sbjct: 475 DRSRSRSRSPLRYRERGGYRRPSPRHSRSRSPAEHQRRDVRNRLR-SGRDGGGPDHRNSS 533
Query: 661 LGPVRVGVQRARGSA 705
PV G R+R +
Sbjct: 534 -PPVNRGRSRSRSKS 547
>05_04_0454 + 21383068-21384525
Length = 485
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +1
Query: 391 GKGMETGPNYSHGILG*CRGCAGLDP*GGTDSARSHSATGAVQRTPGGHQVRGAK 555
G G+ T P + L RG L P SARS S TGA R G H R K
Sbjct: 155 GHGVTTSPRTTTTSLPDSRGMKTLSP---AFSARSSSETGAAARVHGSHMPRRDK 206
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 490 RSHSATGAVQRTPGGHQVRGAKHCRSRRAFDTQRSRHRGR 609
RS AT A R GGH + R TQ+ HRGR
Sbjct: 89 RSGDATSASSRHGGGHADHAVRDVRRGGNVSTQQHHHRGR 128
>02_05_0213 +
26815889-26816475,26817718-26817788,26817985-26818073,
26818910-26818991,26819089-26819204,26819290-26819451,
26819531-26819680,26819969-26820037,26820375-26820491
Length = 480
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 209 EDEEDNVKTLTAEVSELVERTKTFTEESRKRYGGSAPA 322
E+EED + +L ++V V+ TF SRK Y + A
Sbjct: 344 EEEEDEIDSLDSDVDHEVQMPSTFDAASRKGYTSGSQA 381
>11_06_0593 + 25344818-25346083,25346164-25346182,25346285-25347558
Length = 852
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +2
Query: 461 WIRKAELTARDRTLPPEPYRERLVATRSEVPNIADRVERLTRNARAIVEGSRDASERQLV 640
WIR+A ARD E Y + + A S + R+ R++R R++ E R A + Q +
Sbjct: 74 WIRQAMELARDCQDCVEQYAQCIAAGPSSKSLLLGRLRRVSRLVRSLPERHRLAVQIQDI 133
Query: 641 QSTVTALSDQFAS--VCSELEARQAXVED 721
+ + +S + + +C+ L + + +D
Sbjct: 134 KVRLGEVSHRRKAYDICANLNSYRPPEQD 162
>07_01_0934 + 7870920-7871454,7871533-7872413,7873313-7873414
Length = 505
Score = 29.1 bits (62), Expect = 5.0
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 467 RKAELTARDRTLPPEPYRER-LVATRSEVPNIADRVERLTRNARAIVEGSRDASERQLVQ 643
R++EL A LPP PYR R ++ T + D++ L A VE R +S L+
Sbjct: 178 RESELDAPVTVLPPAPYRVRDVMLTAGFGGHAQDQIYELVSRA---VEAVRTSS--GLIL 232
Query: 644 STVTALS-DQFASVCSELE 697
+T AL D+ A++ +L+
Sbjct: 233 NTFDALEHDELAALRRDLD 251
>04_04_0959 +
29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 155 RQQIEVSIAKVRTLYVFGEDEEDNVKTLTAEVSELVERTKTFTEESR 295
+Q EV + + +LY G E + +KTL V +++ K F + S+
Sbjct: 439 QQAKEVLLKNIESLYACGASESNTLKTLIEAVPKILNWYKCFMKVSK 485
>02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385
Length = 373
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 472 GGTDSARSHSATGAVQRTPGGHQVRGAKHCRSRRAFDTQRSRH 600
G ++ S +A A P + R AK C+SR +TQR H
Sbjct: 50 GEKEATSSAAAAAAEAAPPRKKRRRRAKSCKSREETETQRMTH 92
>01_05_0343 +
21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 437 ADVEDVQAWIRKAELTARDRTLPP---EPYRERLVATRSEVPNIADRVE 574
A +ED++A + K +D +PP E E +V+ E +I D+VE
Sbjct: 489 ASLEDLKAVVLKVNTLEQDNAIPPWDEEQIPEEIVSQSPEPGSILDKVE 537
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 478 TDSARSHSATGAVQRTPGG---HQVRGAKHCRSRRAFDTQRSRHRG 606
T+ + G+ +R+ GG + RG+K RS D R RHRG
Sbjct: 20 TNGSGEKDRAGSRRRSSGGGRDDEERGSKRSRSGEDRDRDRDRHRG 65
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 512 APVAECDLALSVPPYGSRPAHPRHQ 438
A V C + L YGSRP HPR++
Sbjct: 255 AVVDRCRMNLGYVTYGSRPFHPRNE 279
>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
Length = 294
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -2
Query: 521 LCTAPVAECDLALSVPPYGSRPAHPRH---QPSIPCE*FGPVSIPFPFLPSL 375
+ P++ C LAL PP P + SIPC F P+ P LP L
Sbjct: 188 IAAVPISTCILALPPPPPPPPPPPSDATGGEVSIPCFPFSPLPFIEPDLPEL 239
>07_03_0345 + 16999633-16999848,17000090-17000116
Length = 80
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 428 EYLADVEDVQAWIRKAELTARDRTLPPEPYRERL 529
E +A VE V +RKAE R + + P P +E++
Sbjct: 40 EVMAGVEPVAETLRKAEAILRMKKMKPPPAKEKV 73
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 218 EDNVKTLTAEVSELVERTKTFTEESRKR 301
E V LT EV LV+RT+ +TE++RK+
Sbjct: 848 EAKVSFLT-EVEHLVQRTREYTEKTRKK 874
>03_02_0431 -
8384259-8384266,8384649-8384787,8385875-8386067,
8386180-8387702
Length = 620
Score = 28.3 bits (60), Expect = 8.7
Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = -2
Query: 608 LPRW-RERCVSNARRDRQCLAPRTWWPPGVLCTAPVAECDLALSVPPYGSRPAHPRHQPS 432
L RW R CV +R L +PPG L +A + +A S P PRH+ S
Sbjct: 27 LARWARAFCVIRFDLERGQLV-EACYPPGALASATGLDRLVAFSSFPDSMSHHLPRHRSS 85
Query: 431 IPCE*FG---PVSIPFPFLPSLRRE-LQTLIPKRTILGQRLPERIPR 303
+ F P P +P RR L + R QR ER+PR
Sbjct: 86 VHDSLFSFRVPGPSPSASVPGSRRGFLYGFVFNR----QRQDERLPR 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,041,371
Number of Sequences: 37544
Number of extensions: 448919
Number of successful extensions: 1605
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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