Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_E01
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 40 0.003
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 40 0.003
AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal pro... 31 0.99
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical pr... 29 3.0
U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein. 29 3.0
U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 29 4.0
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 5.3
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 5.3
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 28 7.0
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 9.2
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical... 28 9.2
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +2
Query: 173 MMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSK---PLLPPHDKKK 343
M++T+ +QY+ D+ P+P+ + KSPLALLA+TC IG+ SK + K
Sbjct: 1 MVSTHSSQYIT-DF-TPVPA--EPGKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQGK 56
Query: 344 VNSVNNSDIISRSSPNSNTMKQDKPRSSPESK 439
+ N+ + ++ PRS+P+SK
Sbjct: 57 KDEKNHILHHQHHQQQQQSKQKSSPRSTPQSK 88
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +2
Query: 173 MMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSK---PLLPPHDKKK 343
M++T+ +QY+ D+ P+P+ + KSPLALLA+TC IG+ SK + K
Sbjct: 1 MVSTHSSQYIT-DF-TPVPA--EPGKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQGK 56
Query: 344 VNSVNNSDIISRSSPNSNTMKQDKPRSSPESK 439
+ N+ + ++ PRS+P+SK
Sbjct: 57 KDEKNHILHHQHHQQQQQSKQKSSPRSTPQSK 88
>AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 17, isoform a protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = -3
Query: 768 RATKSREWIXSW*SRYILESAQMILAVSQNL*SGADYRGLXPDELAEE 625
RA ++++W + R+ ++SA +L + +N S A+Y+GL D L E
Sbjct: 71 RAAQTKQWNTTQ-GRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIE 117
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 332 DKKKVNSVNNSDIISRSSPNSNTMKQDKPRSSPESKHLAFKPYEANVITKKPDETRP 502
+++++N N S+ S+ +P +K++ P+S K P +++ + K P ++ P
Sbjct: 645 EEEELNMTNVSEGSSKENPVKEEIKKETPKSVSPKKFEKKPPVKSSPVNKSPVKSSP 701
>Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical
protein ZK678.5 protein.
Length = 557
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 504 LPKLVRTVPKTRNLERAPRDVNXHRPVVKMEKTV 605
L K+ R+VP+ N E R VN HR VV TV
Sbjct: 203 LQKVDRSVPEILNSENTIRHVNGHRFVVHQAPTV 236
>U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein.
Length = 557
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 504 LPKLVRTVPKTRNLERAPRDVNXHRPVVKMEKTV 605
L K+ R+VP+ N E R VN HR VV TV
Sbjct: 203 LQKVDRSVPEILNSENTIRHVNGHRFVVHQAPTV 236
>U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical
protein W06B4.3 protein.
Length = 962
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 173 FHRLQAPPFGDNFYYHF*TSRYNHVREFNLVYT 75
FH + + G NFY H ++ ++H+++ V T
Sbjct: 21 FHAIVSSKLGHNFYIHLKSNAFHHLKKLRCVVT 53
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.1 bits (62), Expect = 4.0
Identities = 31/170 (18%), Positives = 67/170 (39%), Gaps = 3/170 (1%)
Frame = +2
Query: 2 TGQSLRTSPRAHVSYLRQICAPFAKCTLN*TPLRDCIVKFKSDSKSYLQMVVLEDGGMMA 181
T L+ P + L++ +P T TP + + K +D K Q + M+
Sbjct: 656 TTDVLKADPLVAMDVLKEESSPHTTTTPKNTP-KVVLRKDLNDVKRMKQFCDMATSPMVM 714
Query: 182 TNPNQYLQPDYLAPLPS--TLDSKKSPLALLAQTCSQIGVDSTPSKPL-LPPHDKKKVNS 352
P + + A + + + ++P Q+ +++ PL +P D ++ +
Sbjct: 715 DTPTKLSHENGHAWVGTKQVISVTRTPSLSRRQSRARLSYSKATESPLDMPSSDVRRDSG 774
Query: 353 VNNSDIISRSSPNSNTMKQDKPRSSPESKHLAFKPYEANVITKKPDETRP 502
S ++ + +N+ SSP + HL K + + + K + + P
Sbjct: 775 SLMSPLLKHVTITNNSPPSQVITSSPRTNHLTPKSHTLSPLAVKIERSTP 824
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 167 GGMMATNPNQYLQPDYLAPLPSTLDSKKSPLAL---LAQTCSQIGVDSTPSKPLLPPHDK 337
GG+ A P P +P+ + +SK P+ + +A Q+ V TP+KP++ + K
Sbjct: 570 GGVAADEPPP---PCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPV--TPTKPVITNNKK 624
Query: 338 KKVNSVNNSDIISRSSPNSNTMKQDKPRSSPES 436
K+++ V + +P +KQ+ P S S
Sbjct: 625 KRIDVVT----LDEDAPRRVQVKQEIPEVSSTS 653
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 167 GGMMATNPNQYLQPDYLAPLPSTLDSKKSPLAL---LAQTCSQIGVDSTPSKPLLPPHDK 337
GG+ A P P +P+ + +SK P+ + +A Q+ V TP+KP++ + K
Sbjct: 570 GGVAADEPPP---PCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPV--TPTKPVITNNKK 624
Query: 338 KKVNSVNNSDIISRSSPNSNTMKQDKPRSSPES 436
K+++ V + +P +KQ+ P S S
Sbjct: 625 KRIDVVT----LDEDAPRRVQVKQEIPEVSSTS 653
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 209 DYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSV 355
DY+ KSP A++AQ+ +GV + PL+ H ++K+N +
Sbjct: 172 DYVNNALIGFSDSKSPAAIIAQSLISLGVYMS---PLIAFHYRRKINKI 217
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +2
Query: 149 MVVLEDGGMMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPP 328
+V+L G + P Y P PS KK P+A + + S P P
Sbjct: 11 LVILVQCGYPVAENSYPTTPSYPTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAPPPPA 70
Query: 329 HDKKKVNSVNNSDIISRS-----SPNSNTMKQDKPRSSPESK 439
+S +++++ S S SPNS K+ K R++ K
Sbjct: 71 PSVYSSSSFSDNEVASDSEYTTASPNSEYRKRAKARTAHNRK 112
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 230 STLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQ 409
+T SP + + T S+ DS ++P H +S + ++ RSS +SN+ K+
Sbjct: 24 TTAHPSSSPKSKTSVTSSRSDTDS-----VIPEHKPSSASSFSIGRLLFRSSGSSNSTKR 78
Query: 410 DKPRSSPESK 439
D S + +
Sbjct: 79 DSVDSGKDDE 88
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 230 STLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQ 409
+T SP + + T S+ DS ++P H +S + ++ RSS +SN+ K+
Sbjct: 24 TTAHPSSSPKSKTSVTSSRSDTDS-----VIPEHKPSSASSFSIGRLLFRSSGSSNSTKR 78
Query: 410 DKPRSSPESK 439
D S + +
Sbjct: 79 DSVDSGKDDE 88
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/76 (36%), Positives = 33/76 (43%)
Frame = +2
Query: 215 LAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNS 394
L+P P+TL+ SP S IG S P L + K KV S S S P S
Sbjct: 761 LSPFPATLEEDSSPRHHRHGDHSHIGRQS-PLARELTTNGKVKVQSQR-----SGSWPFS 814
Query: 395 NTMKQDKPRSSPESKH 442
T Q P S PE +H
Sbjct: 815 LTKTQTSP-SRPEGQH 829
>AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical
protein Y66D12A.18 protein.
Length = 286
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 257 LALLAQTCSQIGVDSTPSKPLLP--PHDKKKVN--SVNNSDIISRSSPNSNTMKQDKPRS 424
L L A C+ + P++ +LP P +K + + I R+ P + +KQD PR+
Sbjct: 99 LKLKAPKCALAWGNDRPTREMLPTVPEEKPALGRRDASRGRSIPRAQPPAQDLKQDAPRA 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,682,599
Number of Sequences: 27780
Number of extensions: 401255
Number of successful extensions: 1206
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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