Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D24
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 324 8e-90
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 182 5e-47
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 177 2e-45
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 142 8e-35
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 86 6e-18
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 84 2e-17
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 82 1e-16
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 65 1e-11
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 42 9e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.13
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.70
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.6
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 27 2.8
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.7
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.7
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.9
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 6.5
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 6.5
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 8.6
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 8.6
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 8.6
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 324 bits (797), Expect = 8e-90
Identities = 149/162 (91%), Positives = 154/162 (95%)
Frame = +3
Query: 261 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 440
P IVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY 91
Query: 441 NELRVAPEEHPVQLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 620
NELRVAPEEHP LTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGI
Sbjct: 92 NELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGI 151
Query: 621 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 746
VLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLM IL
Sbjct: 152 VLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 193
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 170 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
Score = 49.6 bits (113), Expect = 6e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 749 ERGYSFTTTAEREXVRDIKXXLCYVAL 829
ERGY+F+TTAERE VRDIK LCYVAL
Sbjct: 195 ERGYTFSTTAEREIVRDIKEKLCYVAL 221
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 182 bits (444), Expect = 5e-47
Identities = 82/159 (51%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
Frame = +3
Query: 261 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 440
P VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + +
Sbjct: 36 PTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYS 95
Query: 441 NE-LRVAPEEHPVQLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 617
++ L PEEHP+ LTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTG
Sbjct: 96 DQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTG 155
Query: 618 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 734
IVL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL
Sbjct: 156 IVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYL 194
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 188 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 755 GYSFTTTAEREXVRDIKXXLCYVA 826
G+ ++AE+E VR+IK CYVA
Sbjct: 202 GHELVSSAEKEIVREIKEKCCYVA 225
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 177 bits (430), Expect = 2e-45
Identities = 82/164 (50%), Positives = 117/164 (71%), Gaps = 2/164 (1%)
Frame = +3
Query: 261 PRIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 434
P IVGRP R + + KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +T
Sbjct: 30 PSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYT 89
Query: 435 FYNELRVAPEEHPVQLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 614
F+ +L++ P + LTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++
Sbjct: 90 FFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSS 149
Query: 615 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 746
G+V+DSGDGV+H VP+YE L H + RLD+AGRD T YL+ +L
Sbjct: 150 GVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLL 193
Score = 39.1 bits (87), Expect = 9e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 176 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
Score = 33.5 bits (73), Expect = 0.043
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 752 RGYSFTTTAEREXVRDIKXXLCYVA 826
+GY+F TA+ E VR++K LCYV+
Sbjct: 196 KGYAFNRTADFETVREMKEKLCYVS 220
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 142 bits (343), Expect = 8e-35
Identities = 68/152 (44%), Positives = 96/152 (63%), Gaps = 9/152 (5%)
Frame = +3
Query: 318 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVQLTEAP 494
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 495 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 650
LNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192
Query: 651 TVPIYEGYALPHAILRLDLAGRDLTDYLMXIL 746
+P+ EGY + +I + LAGRD+T ++ +L
Sbjct: 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLL 224
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 188 LVVDNGSGMCKAGFAGDDAPRAVFPS 265
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 86.2 bits (204), Expect = 6e-18
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Frame = +3
Query: 306 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVQL 482
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 483 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTV 656
TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVI 180
Query: 657 PIYEGYALPHAILRLDLAGRDLTDYLMXI 743
P+ G + R+ G + YL+ +
Sbjct: 181 PVLNGERILSEAKRISWGGSQSSSYLLKL 209
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 188 LVVDNGSGMCKAGFAGDDAPRAVF 259
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 84.2 bits (199), Expect = 2e-17
Identities = 44/138 (31%), Positives = 66/138 (47%)
Frame = +3
Query: 360 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVQLTEAPLNPKANREKMTQIMF 539
+ +K I +G V NWD +W + +L+ P EHP+ +TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 540 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 719
E+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNA 182
Query: 720 LTDYLMXILTSAXTRSLP 773
+ D L L +P
Sbjct: 183 INDILAQTLRDKNFEVMP 200
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 173 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 81.8 bits (193), Expect = 1e-16
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 279 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 452
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 453 VAPEEHPVQLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 632
V P E+ + +TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDI 156
Query: 633 GDGVSHTVPIYEGYALPHAILRLDLAG 713
G + P+ +G + I + LAG
Sbjct: 157 GSDNASVTPVVDGLIIRKGIFKQSLAG 183
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 173 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG-KAPPSGRD 298
EE+ +LV+D GS + G+AG+++P + PS G ++ +GR+
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN 50
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 65.3 bits (152), Expect = 1e-11
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Frame = +3
Query: 375 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVQLTEAPLNPKANREKMTQIMFE 542
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 543 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 722
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231
Query: 723 TDYLMXIL 746
T +L +L
Sbjct: 232 TQHLQNLL 239
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 42.3 bits (95), Expect = 9e-05
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Frame = +3
Query: 324 YVGDEAQSKRGILTLKYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVQLTEA 491
++G+E + TL++ H G + +W +W N + P ++ + LT+
Sbjct: 43 FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQP 102
Query: 492 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG--------------IVLD 629
+ Q++FE F A A L + G T +V+D
Sbjct: 103 VFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVID 162
Query: 630 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXILT 749
SG +H +P+ + A+ R+D+ G+ LT+YL +++
Sbjct: 163 SGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVIS 202
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 559 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 693
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 556 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 693
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 556 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 693
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 8.6
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 556 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 693
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 535 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 693
C+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 535 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 693
C+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 547 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 693
ST P T S S P VPP S T + PT ST SP P+
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 580 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 684
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 459 PEEHPVQLTE-APLNPKANREKMTQIMFETFN 551
PEE ++ E APL+ + +KM +++FET+N
Sbjct: 174 PEEDFFRVLETAPLHAEEVSKKMKELLFETYN 205
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 580 PCSRCTRPVVPPVSCWTPATVSPTPCPST 666
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 556 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 663
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -3
Query: 321 SPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEP 202
+P VP P RP P R A AL +P+P
Sbjct: 538 APEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQP 577
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 351 FCSVPHLLHKSPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEPLSTTNAATSS 172
F S+P + K P+ P P + + A +S+P P P+ + ++TSS
Sbjct: 193 FSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINP--RAPQTRRESISSTSS 250
Query: 171 SH 166
H
Sbjct: 251 IH 252
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 342 VPHLLHKSPSVPYRPSRPDGGA 277
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 215 TYRSHCLLPTRQLLRRTS*ISEI 147
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 371 FEGQDTSFALCLISYIRVLLSHTDHHA 291
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 562 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 705
C +PS+ C + PV + T S TP P+T + +PTP+ T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,633,525
Number of Sequences: 5004
Number of extensions: 79666
Number of successful extensions: 290
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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