Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D18
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0870 + 11964135-11964224,11965013-11965175,11965262-119653... 96 3e-20
07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601 31 1.2
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 30 2.1
08_01_0330 + 2963007-2963540,2964935-2965147 29 5.0
11_05_0084 + 18962892-18963383 28 8.7
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 8.7
03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564... 28 8.7
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 28 8.7
02_05_0071 + 25595374-25595422,25595526-25595596,25596531-255965... 28 8.7
>03_02_0870 + 11964135-11964224,11965013-11965175,11965262-11965380,
11965971-11966083,11966179-11966234,11966320-11966417,
11966588-11966725,11966820-11967125,11967208-11967471,
11967587-11967754,11967838-11968056,11968115-11968158,
11968761-11968830,11968949-11969110,11969672-11969779,
11969873-11969910,11970121-11970265,11970800-11970926,
11971037-11971230,11971529-11971659,11972014-11972089,
11972218-11972328,11972465-11972647,11973264-11973407,
11973946-11973969,11974555-11974728,11974808-11975155,
11975232-11975561,11975776-11975961,11976052-11977026,
11977145-11977399
Length = 1852
Score = 96.3 bits (229), Expect = 3e-20
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Frame = +2
Query: 209 AGELMA-AGMYETVNELYKVLIPIAEEHRDYKKLANIHSKLQEAFTRI-EQLHGKRVF-- 376
A +L A A +Y + +++IP+ + R Y LA H+ L++ + I EQ F
Sbjct: 1501 ANKLFAQAELYHFCASIQELIIPVYKSRRAYGHLAKCHTSLKDIYESILEQEASPIPFID 1560
Query: 377 GTYFRVCFYGQLFGDLHLQQFVYKEHALTKLPEIFSRLENFYSQRF-GAENVVIIKDSNN 553
TY+RV FYG+ FG L+ +++V++E +L +I +L + Y + G + II DS
Sbjct: 1561 ATYYRVGFYGERFGKLNKKEYVFREPRDVRLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQ 1620
Query: 554 VDPATLDPDKAYIQITYVEPYFEPHEL---RRRL----THYERNHNIKRFMYATPFTAEG 712
V+ L P Y+QIT V+P E +L R R+ T R RF++ TPFT G
Sbjct: 1621 VNADELQPGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNG 1680
Query: 713 RAXGDILDKCXGXXSXTTAXXFP 781
+ G + D+ T FP
Sbjct: 1681 KTQGGLEDQWKRRTVLQTEGSFP 1703
>07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601
Length = 390
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +1
Query: 604 RGAVLRASRTPEAPHALRAEPQHQEVHVRHPVHRGGPGSXRHLGQVXRXTIXDH 765
+ A A+ E + A QH H H V GG G H GQV T H
Sbjct: 157 KDAATAAAVADEEKQSAAATQQHNHHHNHHVVGDGGGGGEEHEGQVHVHTHATH 210
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 30.3 bits (65), Expect = 2.1
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Frame = +2
Query: 224 AAGMYETVNELYKVLIPIAEEHRDYKKLANIHSKLQ---EAFTRIEQLHGKRVFGTYFRV 394
AAG V E ++ AEE + + + + +L+ EAF RI+ L V V
Sbjct: 105 AAGDDAAVQEEVIAVLRQAEEGKPVESVRLVDRQLRHLPEAFGRIQGLRVLDVSRNQLEV 164
Query: 395 CFYGQLFGDL-HLQQFVYKEHALTKLPEIFSRLENFYSQRFGAENVVIIKDSNNVDPATL 571
G L HL++ +AL LP+ L N G+ + + DS + + +
Sbjct: 165 I--PDAIGGLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLI 222
Query: 572 DPDKAYIQITYVEPY--FEPHELRRRLTHYER 661
+ D +Y + Y+ +E LR+ H +
Sbjct: 223 ELDASYNGLAYLPTNIGYELVNLRKLWVHMNK 254
>08_01_0330 + 2963007-2963540,2964935-2965147
Length = 248
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 756 PXPPPXXSXXSXQXXGGXKPKYPSPXEVPXRXXKKAP 866
P PPP + GG + + P+P +P R ++ P
Sbjct: 32 PTPPPRLALALRSSRGGDEEEAPTPLSLPLRLDRRDP 68
>11_05_0084 + 18962892-18963383
Length = 163
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 556 GPRHAGPGQGVHPDHIRGAVLRASRTPEAPHALRAEPQHQ 675
G R G G G GA++ P A RA+P+HQ
Sbjct: 107 GGRSPGAGHGAPRHAAEGAIVAIDLLPSASIHYRAKPRHQ 146
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 514 RGRERGHHQGLQQRGPRHAGPGQGVHPDHIRGAVLRASRTPEAPHALRAEPQHQEV 681
RGR RG +G +RG G G+G RG RA+ +P A EP+ + V
Sbjct: 45 RGRGRGRGRGRGRRGGAVRGRGRGRGRCRGRGR-SRAAPSPPAKRRRVEEPEEEVV 99
>03_06_0707 -
35655084-35655215,35656088-35656229,35656358-35656485,
35656852-35656944,35657183-35657252,35657324-35657445,
35658143-35658265,35659453-35659710,35659995-35660074,
35660244-35660389,35660773-35660906,35661001-35661137,
35663013-35663135,35663521-35663590,35663925-35664050,
35664166-35664393
Length = 703
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 371 VFGTYFRVCFYGQLFGDLHLQQFVYKEHALTKLPEIFSRLENF 499
V+ Y + Y L LQ +Y+E+ T+L + RLE +
Sbjct: 178 VYDAYGPLTLYRDLVSQGKLQHDIYQENVATQLDNLLRRLEQY 220
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 517 GRERGHHQGLQQRGPRHAGPGQGVHPDHIRG--AVLRASRTPEAPHALRAEPQ 669
GR GH G QQRG H HP +IR AV+ A+ P P A PQ
Sbjct: 214 GRRDGHGPGHQQRG--H-------HPSYIRAPLAVVTAAPPPPPPFVNPATPQ 257
>02_05_0071 +
25595374-25595422,25595526-25595596,25596531-25596579,
25597026-25597098,25597175-25597466
Length = 177
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 598 HIRGAVLRASRTPEAPHALRAEPQ 669
H RGA+L A TP P ALR EP+
Sbjct: 53 HGRGAIL-ADSTPAVPAALRVEPK 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,791,483
Number of Sequences: 37544
Number of extensions: 299550
Number of successful extensions: 1232
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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