Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D18
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 155 4e-38
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 58 8e-09
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 58 8e-09
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 32 0.47
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 32 0.47
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006810-6|AAF59628.1| 426|Caenorhabditis elegans Cytochrome p4... 28 7.7
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
F46H5.4 protein.
Length = 2018
Score = 155 bits (376), Expect = 4e-38
Identities = 101/299 (33%), Positives = 155/299 (51%), Gaps = 36/299 (12%)
Frame = +2
Query: 5 KHMERSNHAEAGMCLVQGAALVAE-------RLGARGRGAQLLHRVTHNALDESCP---- 151
+H ++ N EA +Q +ALV E L +GA +T NA+ ES
Sbjct: 1570 RHEKQRNLCEAAHSYLQASALVFEYIAQKDQNLSFESKGAATFSEITPNAIKESKTNFNS 1629
Query: 152 ----DALHHHLTHHELQA----LLDHAAGELMAAGMYETVNELYKVLIPIAEEHRDYKKL 307
D+ +H ++H +A +L+ A L A +YE + K+++ + Y ++
Sbjct: 1630 LKNADSENHIQSYHFTEAGVIKILEKAFALLEKAQLYELLFPFSKIILKYYHATKSYSRV 1689
Query: 308 ANIHSKLQEAFTRIEQ---------------LHG--KRVFGTYFRVCFYGQLFGDLHLQQ 436
++ H +L A +I++ L G KR FG++FRV FYG+LFG L+ +
Sbjct: 1690 SHTHKRLGIAADQIKETGEYYENQSDAWISPLPGIDKRCFGSFFRVAFYGKLFGALNNAE 1749
Query: 437 FVYKEHALTKLPEIFSRLENFYSQRFGAENVVIIKDSNNVDPATLDPDKAYIQITYVEPY 616
FVYKE A +KL EI +RLE FY+ +G NVV++KDS V L+P+KAYIQIT+V+ Y
Sbjct: 1750 FVYKESAFSKLNEISNRLETFYTNMYGEGNVVVLKDSKPVQLEKLNPEKAYIQITFVDVY 1809
Query: 617 FEPHELRRRLTHYERNHNIKRFMYATPFTAEGRAXGDILDKCXGXXSXTTAXXFPXXXT 793
+E R T++ R +N+ RF + P+T EGRA G++ + T FP T
Sbjct: 1810 LSDNEKMERTTYFTRRNNVNRFYFEAPYTMEGRAQGELAAQYKKRTILTVENSFPYIKT 1868
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Frame = +2
Query: 173 THHELQALLDHAAGELMAAGMYETVNELYKVLIPIAEEHRDYKKLANIHSKLQEAFTRIE 352
T L A +D A LM A +E V LY++++P+ E++ ++ L +++++LQ+ ++R
Sbjct: 2004 TTDNLGAKIDKTAAALMLAERFEAVGPLYRLIVPVLEKNMNFTSLVSVYAELQQTYSRAA 2063
Query: 353 QLH--GKRVFGTYFRVCFYGQL-FGDLHLQQFVYKEHALTKLPEIFSRLENFYSQRFGAE 523
++ GKR G YFRV F G+ FG H ++Y+E LT L ++ ++ G +
Sbjct: 2064 EVRSSGKRHLGAYFRVRFNGERHFGSEHNTDWIYREAGLTSLAAFALEIKEKCQRQVGHD 2123
Query: 524 NVVIIKDSNNVDPATLDPDKAYIQITYVEP 613
V I+ + +D + +DP AY+QIT+VEP
Sbjct: 2124 RVQ-IEANEQLDLSKIDPTVAYVQITHVEP 2152
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Frame = +2
Query: 173 THHELQALLDHAAGELMAAGMYETVNELYKVLIPIAEEHRDYKKLANIHSKLQEAFTRIE 352
T L A +D A LM A +E V LY++++P+ E++ ++ L +++++LQ+ ++R
Sbjct: 2004 TTDNLGAKIDKTAAALMLAERFEAVGPLYRLIVPVLEKNMNFTSLVSVYAELQQTYSRAA 2063
Query: 353 QLH--GKRVFGTYFRVCFYGQL-FGDLHLQQFVYKEHALTKLPEIFSRLENFYSQRFGAE 523
++ GKR G YFRV F G+ FG H ++Y+E LT L ++ ++ G +
Sbjct: 2064 EVRSSGKRHLGAYFRVRFNGERHFGSEHNTDWIYREAGLTSLAAFALEIKEKCQRQVGHD 2123
Query: 524 NVVIIKDSNNVDPATLDPDKAYIQITYVEP 613
V I+ + +D + +DP AY+QIT+VEP
Sbjct: 2124 RVQ-IEANEQLDLSKIDPTVAYVQITHVEP 2152
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 58.0 bits (134), Expect = 8e-09
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Frame = +2
Query: 164 HHLTHHELQALLDHAAGELMAAGM-YETVNELYKVLIPIAEEH-RDYKKLANIHSKLQEA 337
H H +L+ L AG L + G +E +Y L+P+ + DY KLA + K+ +
Sbjct: 1277 HRELHRQLKEDLMEEAGNLFSKGEDWEDALIVYNQLVPVYQNIIMDYDKLAGLLQKIAQL 1336
Query: 338 FTRIEQLHGKRVFGTYFRVCFYGQLF-GDLHLQQFVYKEHALTKLPEIFSRLENFYSQRF 514
+T I + +R + Y+ V FYGQ F L+ +FV++ L E R+ Y
Sbjct: 1337 YTSISRT--ERAYFYYYLVAFYGQGFPAYLNGHKFVFRSEKLEMHGEFMQRIMKMYD--- 1391
Query: 515 GAENVVIIKDSNNVDPATLDPDKAYIQITYVEPY-----FEPH-ELRRRLTHYERNHNIK 676
E ++ + P +D YIQ+ ++P FE + E++ + Y R +NI+
Sbjct: 1392 NPEKIM----KTDPCPHLVDSPGRYIQVFNIDPIGTGCSFENNPEVKPVIKKYFRYYNIQ 1447
Query: 677 RFMYA 691
F Y+
Sbjct: 1448 TFEYS 1452
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 58.0 bits (134), Expect = 8e-09
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Frame = +2
Query: 164 HHLTHHELQALLDHAAGELMAAGM-YETVNELYKVLIPIAEEH-RDYKKLANIHSKLQEA 337
H H +L+ L AG L + G +E +Y L+P+ + DY KLA + K+ +
Sbjct: 1277 HRELHRQLKEDLMEEAGNLFSKGEDWEDALIVYNQLVPVYQNIIMDYDKLAGLLQKIAQL 1336
Query: 338 FTRIEQLHGKRVFGTYFRVCFYGQLF-GDLHLQQFVYKEHALTKLPEIFSRLENFYSQRF 514
+T I + +R + Y+ V FYGQ F L+ +FV++ L E R+ Y
Sbjct: 1337 YTSISRT--ERAYFYYYLVAFYGQGFPAYLNGHKFVFRSEKLEMHGEFMQRIMKMYD--- 1391
Query: 515 GAENVVIIKDSNNVDPATLDPDKAYIQITYVEPY-----FEPH-ELRRRLTHYERNHNIK 676
E ++ + P +D YIQ+ ++P FE + E++ + Y R +NI+
Sbjct: 1392 NPEKIM----KTDPCPHLVDSPGRYIQVFNIDPIGTGCSFENNPEVKPVIKKYFRYYNIQ 1447
Query: 677 RFMYA 691
F Y+
Sbjct: 1448 TFEYS 1452
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 58.0 bits (134), Expect = 8e-09
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Frame = +2
Query: 164 HHLTHHELQALLDHAAGELMAAGM-YETVNELYKVLIPIAEEH-RDYKKLANIHSKLQEA 337
H H +L+ L AG L + G +E +Y L+P+ + DY KLA + K+ +
Sbjct: 1277 HRELHRQLKEDLMEEAGNLFSKGEDWEDALIVYNQLVPVYQNIIMDYDKLAGLLQKIAQL 1336
Query: 338 FTRIEQLHGKRVFGTYFRVCFYGQLF-GDLHLQQFVYKEHALTKLPEIFSRLENFYSQRF 514
+T I + +R + Y+ V FYGQ F L+ +FV++ L E R+ Y
Sbjct: 1337 YTSISRT--ERAYFYYYLVAFYGQGFPAYLNGHKFVFRSEKLEMHGEFMQRIMKMYD--- 1391
Query: 515 GAENVVIIKDSNNVDPATLDPDKAYIQITYVEPY-----FEPH-ELRRRLTHYERNHNIK 676
E ++ + P +D YIQ+ ++P FE + E++ + Y R +NI+
Sbjct: 1392 NPEKIM----KTDPCPHLVDSPGRYIQVFNIDPIGTGCSFENNPEVKPVIKKYFRYYNIQ 1447
Query: 677 RFMYA 691
F Y+
Sbjct: 1448 TFEYS 1452
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 32.3 bits (70), Expect = 0.47
Identities = 38/110 (34%), Positives = 43/110 (39%), Gaps = 20/110 (18%)
Frame = +1
Query: 445 QGARAHQAARDLQQARELLQPALRGRERGHH--QGLQQRGPRHAGPGQGVHPDHIRGAVL 618
QG HQAA Q Q RGR Q QQR P+ QGV P HI L
Sbjct: 260 QGVAPHQAAPQTIQ-----QTPARGRPANAQLAQNAQQRNPQQVPMPQGVAPHHIPPQAL 314
Query: 619 -----RASRTPEAP---------HALRAEPQ-HQEVHVRHPV---HRGGP 714
T +AP HA A HQ+V ++ PV HRG P
Sbjct: 315 GPHGAAPQMTQQAPARGPSGAAQHAQNAHRMTHQQVPLQAPVQGPHRGAP 364
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 32.3 bits (70), Expect = 0.47
Identities = 38/110 (34%), Positives = 43/110 (39%), Gaps = 20/110 (18%)
Frame = +1
Query: 445 QGARAHQAARDLQQARELLQPALRGRERGHH--QGLQQRGPRHAGPGQGVHPDHIRGAVL 618
QG HQAA Q Q RGR Q QQR P+ QGV P HI L
Sbjct: 260 QGVAPHQAAPQTIQ-----QTPARGRPANAQLAQNAQQRNPQQVPMPQGVAPHHIPPQAL 314
Query: 619 -----RASRTPEAP---------HALRAEPQ-HQEVHVRHPV---HRGGP 714
T +AP HA A HQ+V ++ PV HRG P
Sbjct: 315 GPHGAAPQMTQQAPARGPSGAAQHAQNAHRMTHQQVPLQAPVQGPHRGAP 364
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 536 IKDSNNVDPATLDPDKAYIQITYVEPYFEPHELRRRLTHYERNHNIKRFMYATPFTA 706
I+DS D PD+ Y P F+P++ RL E ++ M P A
Sbjct: 38 IRDSTPRDKLIAHPDRQKRAENYSPPQFKPNKFLHRLKRAENDYAYSLLMKRIPMLA 94
>AC006810-6|AAF59628.1| 426|Caenorhabditis elegans Cytochrome p450
family protein33C12 protein.
Length = 426
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = +2
Query: 278 AEEHRDYKKLANIHSKLQEAFTRIEQLHGKRVFGTYFRVCFYGQLFGDLHLQQFVYKEHA 457
+EE DY + + QEA E K++ T F + F G H+ H
Sbjct: 260 SEESLDYAEAYLKEQRKQEAQGEFELFSTKQLSNTCFDLWFAG--LSTTHITLTWIVGHV 317
Query: 458 LTKLPEIFSRLENFYSQRFGAENVVIIKDSNNV 556
L P++ +L + G++ ++ D NN+
Sbjct: 318 L-NYPDVQRKLHKELDEVIGSDRLITNDDKNNL 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,081,270
Number of Sequences: 27780
Number of extensions: 219606
Number of successful extensions: 789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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