Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_D15
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   6.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   6.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   6.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   6.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 483 GSPIAFPIQSNMIISSS 433
           G P  FP+Q  ++ISSS
Sbjct: 630 GQPQGFPLQFLVVISSS 646


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 297 PGIILCSTSFIT 262
           PGIIL ++SFIT
Sbjct: 310 PGIILVTSSFIT 321


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 297 PGIILCSTSFIT 262
           PGIIL ++SFIT
Sbjct: 279 PGIILVTSSFIT 290


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 297 PGIILCSTSFIT 262
           PGIIL ++SFIT
Sbjct: 330 PGIILVTSSFIT 341


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 297 PGIILCSTSFIT 262
           PGIIL ++SFIT
Sbjct: 279 PGIILVTSSFIT 290


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,054
Number of Sequences: 438
Number of extensions: 5062
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)