Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D14
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0663 + 21653536-21653541,21654027-21654212,21654316-216543... 33 0.39
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 32 0.67
05_04_0158 + 18613265-18615304 30 2.1
11_01_0749 - 6305087-6307522 30 2.7
06_03_0606 - 22689935-22689998,22690716-22691159,22691669-226920... 29 3.6
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 29 6.3
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 29 6.3
11_04_0238 - 15234121-15234189,15234253-15234351,15234438-15234857 28 8.3
06_03_0152 + 17287133-17287490,17288541-17288734,17289349-172895... 28 8.3
04_04_1340 + 32766773-32767582 28 8.3
04_03_0610 - 17972032-17972835 28 8.3
03_05_0399 - 23799830-23800090,23803448-23803558,23803685-23803693 28 8.3
>12_02_0663 +
21653536-21653541,21654027-21654212,21654316-21654393,
21654581-21654694,21654799-21654865,21654954-21655015,
21655123-21655262,21655552-21655678,21655758-21655872,
21656111-21656199,21656593-21656733,21657067-21657192,
21657655-21657714,21658285-21658443
Length = 489
Score = 32.7 bits (71), Expect = 0.39
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +2
Query: 455 FKIEKSQNTSDGDIAYDVKVKFEASQKYEIEHIEDKIQNAKQMQTTSLILKQQLELDMDR 634
F+IE+ Q+ A K +A K E HIE+K+ N +++Q++ L + ELD+ R
Sbjct: 366 FEIEELQDEKTIKRADTSKTLLQAV-KGEKSHIEEKL-NQEELQSSRLKQELANELDLVR 423
Query: 635 QIXQLKNDYASQIEN 679
+ ASQ+EN
Sbjct: 424 NQLSAEEARASQLEN 438
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = +2
Query: 413 YIHSNDDFETPRKRFKIEKSQNTSDGDIAYDVKVKFEASQKYEIEHIEDKIQNAKQMQTT 592
YI DDF K + + +++ + + K S++Y EH + ++ + T
Sbjct: 886 YILKCDDFMVKNKILEAKLQDMSAENALLME---KLTESERYVQEH--ESCESKYKACTE 940
Query: 593 SLILKQQLELDMDRQIXQLKNDYASQIENLQGEKDEVEKQ 712
+ L + Q LK++ S +EN + KDE+ KQ
Sbjct: 941 DRKRFEDLLMKESLQTSHLKDELRSVVENFEAMKDELHKQ 980
>05_04_0158 + 18613265-18615304
Length = 679
Score = 30.3 bits (65), Expect = 2.1
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +2
Query: 458 KIEKSQNTSDGDI--AYDVKVKFEASQKYEIEHIEDKIQNAKQMQTTSLILKQQLELDMD 631
K+ S+ S DI + D K+K E ++ + E + K + K+ Q + +KQ+L +
Sbjct: 506 KVLGSEALSKADIFSSLDAKIKHELGKEQQEEAGKIKHELVKEQQEKAGNIKQELVKEQQ 565
Query: 632 RQIXQLKNDYASQIENL-----QGEKDEVEKQXVFSLNXGMXN*QXVR-KDXEGKISELL 793
+ +K + + E K VEK +L G + + ++ E KI E L
Sbjct: 566 EKAGNIKQESGEEQEKAGKTKHDAGKGHVEKAVGINLEAGKEQEKVEKNQEKEMKIQEKL 625
Query: 794 DQI 802
+I
Sbjct: 626 GEI 628
>11_01_0749 - 6305087-6307522
Length = 811
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 284 WTIEDRSTFGIEINGTKLGKGKSKRLYHQDIINLEPSGEF 403
W + T E NGTK G G+SKR+Y I SG +
Sbjct: 111 WDLSKNRTNTPETNGTKDGGGRSKRVYLGPPIQALSSGGY 150
>06_03_0606 -
22689935-22689998,22690716-22691159,22691669-22692057,
22692130-22692223,22692507-22692599,22692705-22692913,
22692999-22693833,22693948-22694038,22698069-22698892,
22699384-22700489,22701353-22701415
Length = 1403
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 161 NEIHLSSNEFSVGRATQNEAIIPFLSISRNHCIFKKTNDNDWTIEDRSTFGIEINGTKLG 340
+ HL S E ++ Q+ A+I L + R H + +T W + FGI +N + G
Sbjct: 746 HSFHLPSGEMTI--TLQDVAMILALPL-RGHAVTGRTETPGWRAQVEQLFGIPLN-IEQG 801
Query: 341 KGKSKR 358
+G K+
Sbjct: 802 QGGKKK 807
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 44 KLQFFSLKIRCFLLVSEMNDEILPKLITCKPLKDEFNHLNEIHLSSNEFSVGRATQ 211
KLQ F K RCF+++ ++ D+ +LI C L+D NH + + ++ + V ATQ
Sbjct: 276 KLQEFLQKKRCFVVIDDIWDKDSWRLIRC-ALQDS-NHESRVVTTTRIYEV--ATQ 327
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 28.7 bits (61), Expect = 6.3
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Frame = +2
Query: 437 ETPRKRFKIEKSQNTSDGDIAYDVKVKFEASQKYEIEHIEDKIQNAKQMQTTSLILKQQL 616
ET K ++ +N S+ +I D E + ++ +ED+ + M +L+QQL
Sbjct: 465 ETSLDENKQKQLENISNTNILADTTKSHEKKIRELLKQLEDERSRSASMNDHLNVLQQQL 524
Query: 617 E-----------LDMDRQIXQLKNDYASQIENLQGEKDEV--EKQXVF 721
++++Q+ + ++ASQI +L+ ++ EK+ V+
Sbjct: 525 SDAQNYFQKNIACELEKQLSRTTEEFASQISSLEERIADLISEKELVY 572
>11_04_0238 - 15234121-15234189,15234253-15234351,15234438-15234857
Length = 195
Score = 28.3 bits (60), Expect = 8.3
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +2
Query: 416 IHSNDDF--ETPRKRFKIE-KSQNTSDGDIAYDVKVKFEASQKYEIEHIEDKIQNAKQM- 583
+H N+DF E K + + + D I +K K E + I ++ + +++
Sbjct: 73 VHENEDFVLEYDGKVIRYGGEEMDDDDSCIEVSMKEKEEVLKALVISSDDESPTSLRRVY 132
Query: 584 QTTSLILKQQLELDMDRQIXQLKNDYASQIENLQGEKDEVEKQXVFSLNXG 736
+ S K ++ +D D++ KN+ A +++ G ++VEK F+L+ G
Sbjct: 133 ENDSSRQKVEMVVD-DQEKMNEKNEVALRLKGKGGPIEDVEKLSPFNLSQG 182
>06_03_0152 +
17287133-17287490,17288541-17288734,17289349-17289557,
17289640-17289742,17290128-17290291,17290554-17290692,
17290908-17291078,17291162-17291298,17291445-17291759,
17291906-17291965,17292372-17292511,17292691-17292788,
17292875-17293387
Length = 866
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 419 HSNDDFETPRKRFKIEKSQNTSDGDIAYD--VKVKFEASQKYEIEHIEDKIQNAKQ 580
H +DDFE R K T G++ Y+ K +F+ S EDK+ N+KQ
Sbjct: 93 HDDDDFEVDRVDALPVK---TLQGELVYNNAKKARFDDSSNNVESKSEDKVGNSKQ 145
>04_04_1340 + 32766773-32767582
Length = 269
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 524 ASQKYEIEHIEDKIQNAKQMQTTSLILKQQLELDMDRQIXQLKNDYASQIEN----LQGE 691
A + ++ IE ++ A +QT+ L L + ++ +R++ L+N ++EN ++GE
Sbjct: 143 ACRAAHVKAIEVLVELAS-LQTSFLTLDEAIKTT-NRRVNALENVVKPRLENTISYIKGE 200
Query: 692 KDEVEKQXVFSL 727
DE+E++ F L
Sbjct: 201 LDELEREDFFRL 212
>04_03_0610 - 17972032-17972835
Length = 267
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 555 SICSISYFWDASNFTF-TSYAMS 490
S CS + +ASNFTF TSYAMS
Sbjct: 165 SRCSYAALVEASNFTFSTSYAMS 187
>03_05_0399 - 23799830-23800090,23803448-23803558,23803685-23803693
Length = 126
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 623 DMDRQIXQLKNDYASQIENLQGEKDEVEKQ 712
D++ ++ Q+K D A ++E L+ EK+ + Q
Sbjct: 76 DVETRLEQMKEDAAKKLERLEQEKESIVSQ 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,223,883
Number of Sequences: 37544
Number of extensions: 313660
Number of successful extensions: 780
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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