Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D11
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 159 5e-40
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 73 7e-14
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 66 8e-12
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 53 6e-08
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 43 6e-05
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 41 3e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 4e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 39 0.001
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.002
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 37 0.003
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.004
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 36 0.010
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 33 0.039
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.64
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 3.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 3.4
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 159 bits (386), Expect = 5e-40
Identities = 86/173 (49%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 426
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 427 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXT 606
++S WRGN ANV+RYFPTQALNFAFKDK+K++F G ++ + ++F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAA 145
Query: 607 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISXIFKSDGLIGSVQRF 759
SL FVY LD+ARTRLA D K G+R+F+GL + ++SDGL G + F
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGF 198
Score = 39.5 bits (88), Expect = 6e-04
Identities = 34/140 (24%), Positives = 56/140 (40%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 429
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 430 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTS 609
+RG +V+ + L F D K V L G + F F S
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG-PLEGNFLASFLLGWAVTTGSGVAS 250
Query: 610 LCFVYPLDFARTRLAADVGK 669
YPLD R R+ G+
Sbjct: 251 ----YPLDTIRRRMMMTSGE 266
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 762 GVSVQGIIIYRASYFG 809
G SV GI++YR YFG
Sbjct: 199 GPSVVGIVVYRGLYFG 214
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 72.5 bits (170), Expect = 7e-14
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 445 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC-FV 621
GN N +R FP A+ FA + KQ L K + C
Sbjct: 78 GNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERLLFGAIAGAASCATT 133
Query: 622 YPLDFARTRLAAD 660
YPLD ARTRL+ +
Sbjct: 134 YPLDIARTRLSIE 146
Score = 43.6 bits (98), Expect = 4e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +1
Query: 220 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 399
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 400 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 495
I K +G+ F+RG +N+++ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 65.7 bits (153), Expect = 8e-12
Identities = 41/133 (30%), Positives = 66/133 (49%)
Frame = +1
Query: 256 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 435
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 436 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 615
++G+ A + R FP + F ++ ++V + + +T R+ S+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFL-----SGSLAGTCSVF 132
Query: 616 FVYPLDFARTRLA 654
F YPL+ R RLA
Sbjct: 133 FTYPLELIRVRLA 145
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 52.8 bits (121), Expect = 6e-08
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 238 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 417
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 418 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXX 597
G+ SF+ GN NV++ P ++ F + K+V G+ ++
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVL--GISSSSENHSPLYSYLAGGMAG 239
Query: 598 XXTSLCFVYPLDFARTRL-AADVGKGDGQREFSGLGNCISXIFKSDGLIG 744
+ F+YP+D + R+ +D+ +G + L N ++KS G+ G
Sbjct: 240 SVAQM-FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRG 286
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +1
Query: 271 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 450
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 451 FANVIRYFPTQALNFAFKDKYKQ 519
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
Score = 40.3 bits (90), Expect = 3e-04
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 438
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 439 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG------GVDKKTQFWRYFXXXXXXXXXXX 600
+RG ++ FP A + + K+ ++G VD +
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQ-DVKLPNGLVMAFGALSG 346
Query: 601 XTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISXIFKSDGLIG 744
T V+PL+ RTRL G + G +C K++G G
Sbjct: 347 STGATIVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRG 393
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 42.7 bits (96), Expect = 6e-05
Identities = 27/96 (28%), Positives = 52/96 (54%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 445 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQ 552
G ++ P A+++A + K++ + V K +Q
Sbjct: 268 GIRPRMVVAMPATAVSWAAYEAGKEILI-RVSKTSQ 302
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 441
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 442 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 543
RG + ++ P+ A+ F+ + +K D+
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFKSKINASPDR 112
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQG 426
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 427 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 546
+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
Score = 29.5 bits (63), Expect = 0.64
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +1
Query: 364 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 543
A Y DAF +I K +GL +F+RG F ++ + F + +K K
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGK 283
Query: 544 KTQF 555
K+ F
Sbjct: 284 KSNF 287
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.9 bits (89), Expect = 4e-04
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 238 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 417
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 418 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 525
+G +RG ++ P +AL FA D Y +++
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 34.3 bits (75), Expect = 0.022
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGL 429
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++ +
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERI 157
Query: 430 LSFWRGNFANVIRYFPTQALNFAFKDKYK 516
L+ + G A + R+ A F K +
Sbjct: 158 LALYNGFEATMWRHVVWNAGYFGVIQKIR 186
Score = 33.9 bits (74), Expect = 0.030
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 619 VYPLDFARTRLAADVGKGDGQREFSGLGNCISXIFKSDG 735
+YPLD +TR+ VGK D ++G +C+ I K++G
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEG 60
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 38.7 bits (86), Expect = 0.001
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Frame = +1
Query: 247 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 423
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 424 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 603
GL +F++G ++ ++ F + K+ F T Y
Sbjct: 70 GLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYY-----VSGAISGL 124
Query: 604 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISXIFKSDGLIGSVQRF 759
+ V P++ R RL GK + G +CI I GL G ++ +
Sbjct: 125 ANSFLVGPVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGY 173
Score = 34.7 bits (76), Expect = 0.017
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 241 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 420
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 421 QGLLSFWRG 447
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 441
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 442 RGNFANVIRYFPTQALNFAFKDKYKQV 522
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 37.1 bits (82), Expect = 0.003
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Frame = +1
Query: 106 YSKSPVQKSGVSVS*SPIRVCRNSHLXHIHLVKIT*SNKMSNLADPVAFAKDFLAGGISA 285
+ + P +S +S S I+ NS + L K +N SN P + F+AGG++
Sbjct: 4 HCQEPKIRSLDMLSNSEIKPSENSQKTKVLLTK---ANNASNERAPPPLSH-FIAGGVAG 59
Query: 286 AVSKTAVAPIERVKLLLQVQHVS----KQIAADQ-----RYKGIVDAFV---RIPKEQGL 429
+ A AP++ VK LQ KQ A + Y+ +D + + +G
Sbjct: 60 MLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNVKVHEGT 119
Query: 430 LSFWRGNFANVIRYFPTQALNF 495
+ +RG N+I P +++NF
Sbjct: 120 RALFRGLGPNLIGTIPARSINF 141
Score = 30.3 bits (65), Expect = 0.36
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 274 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 453
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 454 ANVIRYFPTQALNF 495
A+++R P + F
Sbjct: 337 AHLLRVVPNACILF 350
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 438
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 439 WRG 447
RG
Sbjct: 87 QRG 89
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 35.5 bits (78), Expect = 0.010
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 445 GNFANVIRYFPTQALNFAFKDKYKQV 522
GN + Y A F K K +
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL 95
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 445 GNFANVIRYFP 477
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 33.5 bits (73), Expect = 0.039
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Frame = +1
Query: 256 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQG 426
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 427 LLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKKT 549
+ FW G F + + F AL VF G+D+KT
Sbjct: 227 AVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.5 bits (63), Expect = 0.64
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 685 HAGHRPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 527
H P R R RD RS +RS R HR DY RS ++ + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 438
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 439 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 531
W G + R P A + ++ + LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 3.4
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Frame = +1
Query: 220 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 399
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 400 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD--KYKQVFLGGVDKKTQF 555
F I ++GL + G +I Y + F + K+K L G K ++
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEY 118
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 404 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 297
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,133,745
Number of Sequences: 5004
Number of extensions: 59994
Number of successful extensions: 198
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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