Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D10
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 31 0.83
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 31 0.83
AC006790-8|AAF60730.1| 294|Caenorhabditis elegans Hypothetical ... 31 0.83
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 30 1.9
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 30 1.9
AF040642-1|AAN73871.2| 272|Caenorhabditis elegans Hypothetical ... 29 3.4
AF024499-4|AAY55833.1| 122|Caenorhabditis elegans Hypothetical ... 29 4.4
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 490 LNLHVRERPVFLSGATSVSLLFYVDRSFSLAC 395
+N+HVR +P F SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 490 LNLHVRERPVFLSGATSVSLLFYVDRSFSLAC 395
+N+HVR +P F SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 490 LNLHVRERPVFLSGATSVSLLFYVDRSFSLAC 395
+N+HVR +P F SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 490 LNLHVRERPVFLSGATSVSLLFYVDRSFSLAC 395
+N+HVR +P F SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 490 LNLHVRERPVFLSGATSVSLLFYVDRSFSLAC 395
+N+HVR +P F SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>AC006790-8|AAF60730.1| 294|Caenorhabditis elegans Hypothetical
protein Y49F6B.3 protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 655 CLITQSPDFNMHFDFPTVSTCWESLYSLTEVAKCTCLLFFLAFVALHSNVXRDVELNLHV 476
CL P FN H +F T+ +S Y+L +V L+ + + DVELNL++
Sbjct: 147 CLSIIDPSFNSHANFETLDIHDDSTYTLNDV-----LVMNSPNILISLGTLSDVELNLYL 201
Query: 475 R 473
+
Sbjct: 202 K 202
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 544 LFFLAFVALHSNVXRDVELNLHVRERPVFLSGAT 443
L L+ V LH N + ++ NL + ERP + +GAT
Sbjct: 94 LLKLSDVKLHQNYNQVIDHNLKINERPRWFNGAT 127
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 544 LFFLAFVALHSNVXRDVELNLHVRERPVFLSGAT 443
L L+ V LH N + ++ NL + ERP + +GAT
Sbjct: 94 LLKLSDVKLHQNYNQVIDHNLKINERPRWFNGAT 127
>AF040642-1|AAN73871.2| 272|Caenorhabditis elegans Hypothetical
protein C50D2.6 protein.
Length = 272
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 536 KKQKTRAFCYFCQAVQRLPTCAH-CGKVKMHVKVWRLCY*TSR--CLQH 673
K+ R+F CQA R+ C H C KV H R Y R C++H
Sbjct: 64 KELTERSFYDICQAYTRVDLCLHSCEKVSQHSASIRKTYAGIRFICVEH 112
>AF024499-4|AAY55833.1| 122|Caenorhabditis elegans Hypothetical
protein F42G2.7 protein.
Length = 122
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 540 NRRHVHFATSVKLYRDSQHVLTVGKSKCMLKSGDCVIRHPGVYNTGNG 683
N+ H A ++ Y + + +++ + +K+GD V HP +++ G+G
Sbjct: 52 NKNHFQGAVNMAYYANKDYGMSLPRESVEMKAGDFVFYHPCLFH-GSG 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,742,168
Number of Sequences: 27780
Number of extensions: 412137
Number of successful extensions: 1167
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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