Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D07
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 71 1e-12
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 71 1e-12
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 71 1e-12
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 71 1e-12
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 71 1e-12
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 71 1e-12
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 71 1e-12
Z75953-4|CAJ85747.1| 294|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-... 41 0.001
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 32 0.44
AL132949-13|CAB70106.2| 425|Caenorhabditis elegans Hypothetical... 32 0.58
AF197575-1|AAF18441.1| 425|Caenorhabditis elegans ASC-1 protein. 32 0.58
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 31 1.0
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 3.1
AL034364-4|CAA22250.2| 290|Caenorhabditis elegans Hypothetical ... 29 3.1
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 4.1
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 28 7.1
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 28 7.1
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 28 7.1
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 7.1
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 7.1
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 28 7.1
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 28 9.4
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 28 9.4
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 9.4
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +1
Query: 274 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 441
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 442 --GGRLHTGSLRG-PSCVLPINDXXXXXXXXXXXXXXXLRCKLAAVYRLVDLFGWTTTGV 612
G + G+L + I D R KLA ++RL DLF W + G+
Sbjct: 87 VPQGNMSFGNLHTYGGNTIAIADLRGNEKYSKAERIQ--RNKLACLFRLADLFQW-SQGI 143
Query: 613 TGQITXRLNTAEEQVLTSPRGLLPHE 690
+I+ R N + L +P GLL HE
Sbjct: 144 HNEISYRTNDEDNTFLMNPFGLLYHE 169
>Z75953-4|CAJ85747.1| 294|Caenorhabditis elegans Hypothetical
protein F57F5.4b protein.
Length = 294
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 550 RCKLAAVYRLVDLFGWTTTGVTGQITXRLNTAEEQVLTSPRGLLPHE 690
R KLA++YRLVDLF W + G+ IT R++T +++L + G L E
Sbjct: 41 RNKLASLYRLVDLFRW-SQGIYNHITVRVSTDPDEILINAFGQLYSE 86
>Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical
protein F57F5.4a protein.
Length = 611
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 550 RCKLAAVYRLVDLFGWTTTGVTGQITXRLNTAEEQVLTSPRGLLPHE 690
R KLA++YRLVDLF W + G+ IT R++T +++L + G L E
Sbjct: 358 RNKLASLYRLVDLFRW-SQGIYNHITVRVSTDPDEILINAFGQLYSE 403
>AF166171-1|AAD49860.1| 611|Caenorhabditis elegans
adducin-head-domain-related protein protein.
Length = 611
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 550 RCKLAAVYRLVDLFGWTTTGVTGQITXRLNTAEEQVLTSPRGLLPHE 690
R KLA++YRLVDLF W + G+ IT R++T +++L + G L E
Sbjct: 358 RNKLASLYRLVDLFRW-SQGIYNHITVRVSTDPDEILINAFGQLYSE 403
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +2
Query: 221 SRTAPGPC--PPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRC 394
S T GPC PP A S+ A W AGS + +SCP + + G+S S C
Sbjct: 1248 SGTGTGPCYTPPLTPVGA---TLTYSSGYFAPWTAGSTATMSCP---AGQTVIGTSISYC 1301
Query: 395 TRAA---TLRSCRGSRRWSAGDCTPEAS 469
T +A L SC GS A T S
Sbjct: 1302 TNSAWSPALGSCSGSSVGQASTTTTTCS 1329
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 250 EEEDERLKQRPADIDADVREMERRKRV-EALMSSKLFREELERVLDQQMHEGGDAPLLQR 426
EE+++R K ++ ++E E+RKRV E M K EE + L+ +M E + ++R
Sbjct: 449 EEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKR 508
Query: 427 IKE 435
+E
Sbjct: 509 REE 511
>AL132949-13|CAB70106.2| 425|Caenorhabditis elegans Hypothetical
protein Y53F4B.15 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +1
Query: 202 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 381
++D TI N P + + E LK R ++ A +RE ER+K V +L E+ R
Sbjct: 141 QSDYSTIENS--PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRS 197
Query: 382 DQQMHEGGDAPLLQRIKEMV 441
+ + + P++QRI E V
Sbjct: 198 GTEALQDKNDPVIQRIMERV 217
>AF197575-1|AAF18441.1| 425|Caenorhabditis elegans ASC-1 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +1
Query: 202 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 381
++D TI N P + + E LK R ++ A +RE ER+K V +L E+ R
Sbjct: 141 QSDYSTIENS--PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRS 197
Query: 382 DQQMHEGGDAPLLQRIKEMV 441
+ + + P++QRI E V
Sbjct: 198 GTEALQDKNDPVIQRIMERV 217
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 626 VICPVTPVVVQPNKSTSRYTAASLQRSIFSPF-SYPMPSIPRMSLIGKTQLGPLRLPVCS 450
VI P +P +S +T A+ Q S +P + S P S+IG + L +
Sbjct: 796 VIPSTMPTTPEPPTISSTFTPAATQASPATPTPQHVAQSAPTNSIIGGS------LDSFT 849
Query: 449 LPPTISLILCRSGASPPS 396
PP I+ ++ S ASPP+
Sbjct: 850 NPPIIAALISSSAASPPA 867
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 250 EEEDERLKQRPADIDADVREMERRKR-VEALMSSKLFREELERVLDQQMHEGGD 408
EEE RL + +A VR+ ERR++ E + +L + + + +Q +EGGD
Sbjct: 190 EEESRRLAAQRETDEARVRDEERRRQETEKEVEKELNDKRTQSMNEQFEYEGGD 243
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/66 (22%), Positives = 37/66 (56%)
Frame = +1
Query: 241 LSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLL 420
L E ED R+ + +++++ E E +++ K ++L+ +++++++ GD L
Sbjct: 49 LEFEPEDRRVPEVAEEVESEDEE-EEDVQIKYPYERKDAYQDLQERIERRLNDSGDEKLE 107
Query: 421 QRIKEM 438
Q+ KE+
Sbjct: 108 QKAKEL 113
>AL034364-4|CAA22250.2| 290|Caenorhabditis elegans Hypothetical
protein W06D4.2 protein.
Length = 290
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2
Query: 567 GGQLAAEYLLPLLIPYAFDTSDV 499
GGQL+ Y L LI Y FDTS V
Sbjct: 96 GGQLSGAYALTPLIQYVFDTSVV 118
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 253 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 372
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 253 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 372
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 253 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 372
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 196 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 375
M E D + + N + S EEE+ + + D D +E ERR++ EA R L
Sbjct: 248 MNEKDDDDV-NKSVEESDEEEENQESEEQEDNDKAEKEEERRRQEEAARQHSKRRRTLRH 306
Query: 376 VL 381
+L
Sbjct: 307 LL 308
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 341 CPRSCSAKNWNGSSTS-RCTRAATLRSCRGSRRWSAGDCTP-EASGVLAAFCRS 496
CP+SCS ++ S++S C +A L C G + C+ E G+ C S
Sbjct: 244 CPKSCSQCFYSNSTSSYECCDSACLGGCTGHGPKNCIACSKYELDGICIETCPS 297
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 341 CPRSCSAKNWNGSSTS-RCTRAATLRSCRGSRRWSAGDCTP-EASGVLAAFCRS 496
CP+SCS ++ S++S C +A L C G + C+ E G+ C S
Sbjct: 244 CPKSCSQCFYSNSTSSYECCDSACLGGCTGHGPKNCIACSKYELDGICIETCPS 297
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 341 CPRSCSAKNWNGSSTS-RCTRAATLRSCRGSRRWSAGDCTP-EASGVLAAFCRS 496
CP+SCS ++ S++S C +A L C G + C+ E G+ C S
Sbjct: 295 CPKSCSQCFYSNSTSSYECCDSACLGGCTGHGPKNCIACSKYELDGICIETCPS 348
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 179 RLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 334
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 179 RLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 334
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 TEEEDERLKQRPADIDAD---VREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPL 417
T E+ LK D+ A+ ++EM+ R L SK F+E L R+ D+ D
Sbjct: 82 TTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTRISDENTKLQKDCHE 141
Query: 418 LQRIKE 435
L+ I++
Sbjct: 142 LESIRQ 147
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 334 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 444
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 82 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 116
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 334 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 444
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 87 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 121
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -1
Query: 277 AASSARLPPR--WTGARCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESCTVQQ 104
+ +A PP+ +G + + +LS S P S+ + WV VA+ +S +
Sbjct: 68 STENAFQPPKDLISGRKPKGAPNLSGSVPLSHKSSLTGGADKWVGEAVAKNWMDSIDTAE 127
Query: 103 MARRSDKL 80
+ + DKL
Sbjct: 128 VKKEYDKL 135
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 253 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLD-QQMHEGGDAPLLQRI 429
+ +E +KQ+ + + + + ++++E L KLF + + L ++ H+ + L+++
Sbjct: 249 KREEEIKQQNQEREKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRKLEKL 308
Query: 430 K 432
K
Sbjct: 309 K 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,575,901
Number of Sequences: 27780
Number of extensions: 382468
Number of successful extensions: 1673
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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