Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_D03
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical pr... 63 3e-10
Z73906-1|CAA98114.1| 540|Caenorhabditis elegans Hypothetical pr... 62 6e-10
Z68270-2|CAA92567.1| 532|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 33 0.25
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 31 1.4
Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 2.4
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 29 4.1
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 28 7.2
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 28 7.2
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 28 7.2
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 28 7.2
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 28 7.2
AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three par... 28 7.2
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 28 7.2
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 28 9.5
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 28 9.5
>Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical
protein C52E4.5 protein.
Length = 590
Score = 62.9 bits (146), Expect = 3e-10
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 668 NADPDQKQKLETVKEMMRHAWNNYKLYAWGKNELKPISKRAHLSXVFGSGEXGXXIVD 841
N D + + + VKEMM HAW YK Y+WG NEL+P+SK+ + +FG + IVD
Sbjct: 131 NKDEENDLRRQKVKEMMIHAWEGYKNYSWGANELRPMSKKPNSQNIFGGSQMPATIVD 188
>Z73906-1|CAA98114.1| 540|Caenorhabditis elegans Hypothetical
protein D2030.1 protein.
Length = 540
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +2
Query: 671 ADPDQKQKLETVKEMMRHAWNNYKLYAWGKNELKPISKRAHLSXVFGSGEXGXXIVD 841
A D + + VK+M++ AW+ Y+ YAWG+NEL+P S+ H S +FG G+ G I+D
Sbjct: 82 ASDDAEGRRIFVKQMIKFAWDGYRKYAWGENELRPNSRSGHSSSIFGYGKTGATIID 138
>Z68270-2|CAA92567.1| 532|Caenorhabditis elegans Hypothetical
protein ZC410.3 protein.
Length = 532
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +2
Query: 620 PKPDGSNRYVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNELKPISKR 787
PK R V GP +++QK + +HAW+ YK YAWG +EL+P+SKR
Sbjct: 63 PKATKLKRAPPVFQGPT---NERQK--AIVRAFQHAWSGYKKYAWGHDELRPVSKR 113
>U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical
protein T03G11.4 protein.
Length = 584
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +2
Query: 620 PKPDGSNRYVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNELKPISK 784
P+ G N + GP D +QK V + +HAW YK YAWG + LKP+SK
Sbjct: 118 PETGGGNEKIVKFTGPTND---RQK--AVVKAFQHAWIGYKKYAWGHDTLKPVSK 167
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 33.1 bits (72), Expect = 0.25
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 13/150 (8%)
Frame = +2
Query: 383 PVVGIVRHGEEGDDPHIVED----RNRLKAKIDEDMGM-KVLERPQFDVAPSVSSSRGPS 547
P V + E G+DPH D + L++ +D D K + + + S+ + S
Sbjct: 562 PTVAVCPATETGEDPHASSDPSPSTSDLRSSMDADPATEKRATEERSESSRSLPPTVDVS 621
Query: 548 KPPVDAIE--EPAVRNFAAKDASPAGPKPDGSNRYV--AVAIGPNADPDQKQKLETVKEM 715
PP A P A+ DASP P + + + +G N + KLE V +
Sbjct: 622 SPPPVASSSCSPYPALLASADASPQVPAWASARSSISRSTPVGRNIQAHLQPKLEPVDDE 681
Query: 716 MRHAWNNYKLYAWGK----NELKPISKRAH 793
+R + +K + + ELKP SK+ H
Sbjct: 682 IR--FLGFKSASTPQKVEHKELKPASKKLH 709
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +2
Query: 410 EEGDDPHIVEDRNRLKAKIDE----DMG-MKVLERPQFDVAPSVSSSRGPSKPPV-DAIE 571
EE D+ E RNRLKA+++ D+ MK + P D +P ++ P + + +E
Sbjct: 420 EEEDEDEETERRNRLKAELEPLETIDLSQMKFMTTPLKDKSPILTPVHRPEEIEFREELE 479
Query: 572 EPAVRNFAAKDASPAGPK 625
P F + +P PK
Sbjct: 480 LPRFEQFEPMNVNPISPK 497
>Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical
protein C47E12.3 protein.
Length = 568
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 671 ADPDQKQKLETVKEMMRHAWNNYKLYAWGKNELKPISKR 787
+D D + L +EM + W+NY +A+ +EL PI R
Sbjct: 40 SDVDLQYGLAKTREMFQFGWDNYMEHAFPADELDPIHCR 78
>Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical
protein ZC506.1 protein.
Length = 931
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 680 DQKQKLETVKEMMRHAWNNYKLYAWGKNELKPISKRAHLSXV 805
D+K+ + +M H +N+Y YA+ +EL P+S + + V
Sbjct: 25 DKKKLQKEAYDMFMHGYNSYMNYAFPADELMPLSCKGRIRGV 66
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 539 GPSKP--PVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADP 679
GP P P + +P A KD P P PDG + A GPN +P
Sbjct: 156 GPEGPAGPAGSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEA-GPNGEP 203
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 494 ERPQFDVAPSVSSS-RGPSKP-PVDAIEEPAVRNFAAKDASPAGPKPDG 634
E PQ V PS GP P PVD E+P ++D P+GP G
Sbjct: 131 EDPQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPG 179
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 590 FAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKL 745
F + A A P PD VAV + N D+++ E + EM+R YK+
Sbjct: 434 FVKESAVIAAPHPDFGEAVVAVVVPKNMVEDEQKFEEDLIEMLRKKLAKYKV 485
>Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical
protein F10C2.5 protein.
Length = 781
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 605 ASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNELKPIS 781
AS PD N+ ++ P+ ++K V++M HA+N Y +A+ +ELKPI+
Sbjct: 18 ASDDSEAPD--NKKSSIRFTPSVIDSYREK---VQKMFYHAYNGYLDHAFPLDELKPIT 71
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 542 PSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKL 697
P PP DA PA +A+PA P D A + G + P +K+++
Sbjct: 42 PPPPPADAAPAPAPA--PEPEAAPAAPAADAGGYAAAASAGGGSYPAKKRRV 91
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 425 PHIVED--RNRLKAKIDEDMGMKVLERPQFDVAPSV-SSSRGPSKP 553
PH E+ NRL A+ + D+GM L + V P++ + GP+KP
Sbjct: 199 PHTCENYSMNRLSAQFNYDIGMYYLNNGRLLVDPAIFHYTLGPTKP 244
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 425 PHIVED--RNRLKAKIDEDMGMKVLERPQFDVAPSV-SSSRGPSKP 553
PH E+ NRL A+ + D+GM L + V P++ + GP+KP
Sbjct: 199 PHTCENYSMNRLSAQFNYDIGMYYLNNGRLLVDPAIFHYTLGPTKP 244
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 644 YVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNE 766
++ VA+ D D+K ++ V + + WN+Y L W K E
Sbjct: 51 HLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNL-VWDKAE 90
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 400 NDTDYRKVSHIVLSEWRRH*QLWTRFLNTFIH--IVNTVIHTARTFKF 263
N+T ++ + +W++H ++ T +N FI VN + H + + F
Sbjct: 150 NETLMMALARVFREDWKKHFEVGTNIMNLFIGTLCVNAMEHETKRYDF 197
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 644 YVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNE 766
++ VA+ D D+K ++ V + + WN+Y L W K E
Sbjct: 51 HLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNL-VWDKAE 90
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 644 YVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNE 766
++ VA+ D D+K ++ V + + WN+Y L W K E
Sbjct: 51 HLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNL-VWDKAE 90
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 644 YVAVAIGPNADPDQKQKLETVKEMMRHAWNNYKLYAWGKNE 766
++ VA+ D D+K ++ V + + WN+Y L W K E
Sbjct: 51 HLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNL-VWDKAE 90
>AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three
paralog protein 3 protein.
Length = 739
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -3
Query: 639 LDPSGLGPAGDASLAAKFLTAGSSIASTGGLLGP--REEDTEGATSNCGLSRTFMP 478
+DPSG PA + SSI G L +EDTE +T N S+ F P
Sbjct: 667 VDPSGAAPA---IATERHYGRVSSILDVAGSLSDVDPQEDTESSTQNQSTSKKFKP 719
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 400 NDTDYRKVSHIVLSEWRRH*QLWTRFLNTFIH--IVNTVIHTARTFKF 263
N+T ++ + +W++H ++ T +N FI VN + H + + F
Sbjct: 150 NETLMMALARVFREDWKKHFEVGTNIMNLFIGTLCVNAMEHETKRYDF 197
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +2
Query: 395 IVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEE 574
I+R E D D LKAK++E K+ E + + P+ PP+D
Sbjct: 413 ILRLREFDKDDKTYYDEETLKAKLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPAS 472
Query: 575 P 577
P
Sbjct: 473 P 473
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 476 MGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKP 628
+G+ +++ + P S + P+ PP + PA+R AK S P+P
Sbjct: 72 IGLPIIQITTKEPQPPASLTSLPAAPPSAQVAPPAIRPPEAKRTSLEPPQP 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,287,287
Number of Sequences: 27780
Number of extensions: 389114
Number of successful extensions: 1239
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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