Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C23
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 158 4e-39
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 158 4e-39
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 158 4e-39
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 89 4e-18
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 89 4e-18
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 89 4e-18
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 73 3e-14
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 72 7e-13
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 67 2e-11
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 65 8e-11
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 65 8e-11
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 64 1e-10
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 50 2e-06
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 50 2e-06
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50028-2|CAA90337.1| 158|Caenorhabditis elegans Hypothetical pr... 29 3.5
DQ365984-1|ABD14369.1| 161|Caenorhabditis elegans F46F6.3 prote... 29 3.5
Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z54236-3|CAA90985.1| 196|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 158 bits (384), Expect = 4e-39
Identities = 80/167 (47%), Positives = 118/167 (70%), Gaps = 12/167 (7%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
T+RP R+ EV+GRDY+FV ++ ME D++N+LFIEAGQ+ +NLYGTS+ SVR+VA +G+H
Sbjct: 801 TSRPPREGEVNGRDYYFV-NKHNMEEDVKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRH 859
Query: 187 CILDVSGNAIKRLQV-AQLFPIAIFIKPKSVESIMEM----------NKRMTEEQAKKTY 333
CILDVSGNAI+RLQ A + PI+IFIKP S + I+E+ ++ M+ E+A+ Y
Sbjct: 860 CILDVSGNAIRRLQSNANIQPISIFIKPSSAQQILELDSQLATNRQDDRAMSGEEAQAQY 919
Query: 334 ERALKMEQEFAEYFTAVVTG-DTPEEIYSKVKAVIAAESGPSVWVPR 471
R ++EQ F + FT ++ + ++ SKV ++I+ ES +WVPR
Sbjct: 920 SRCHRIEQTFGDLFTQEISNVHSANDVLSKVYSIISRESQTPIWVPR 966
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 158 bits (384), Expect = 4e-39
Identities = 80/167 (47%), Positives = 118/167 (70%), Gaps = 12/167 (7%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
T+RP R+ EV+GRDY+FV ++ ME D++N+LFIEAGQ+ +NLYGTS+ SVR+VA +G+H
Sbjct: 801 TSRPPREGEVNGRDYYFV-NKHNMEEDVKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRH 859
Query: 187 CILDVSGNAIKRLQV-AQLFPIAIFIKPKSVESIMEM----------NKRMTEEQAKKTY 333
CILDVSGNAI+RLQ A + PI+IFIKP S + I+E+ ++ M+ E+A+ Y
Sbjct: 860 CILDVSGNAIRRLQSNANIQPISIFIKPSSAQQILELDSQLATNRQDDRAMSGEEAQAQY 919
Query: 334 ERALKMEQEFAEYFTAVVTG-DTPEEIYSKVKAVIAAESGPSVWVPR 471
R ++EQ F + FT ++ + ++ SKV ++I+ ES +WVPR
Sbjct: 920 SRCHRIEQTFGDLFTQEISNVHSANDVLSKVYSIISRESQTPIWVPR 966
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like protein
DLG-1 protein.
Length = 967
Score = 158 bits (384), Expect = 4e-39
Identities = 80/167 (47%), Positives = 118/167 (70%), Gaps = 12/167 (7%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
T+RP R+ EV+GRDY+FV ++ ME D++N+LFIEAGQ+ +NLYGTS+ SVR+VA +G+H
Sbjct: 801 TSRPPREGEVNGRDYYFV-NKHNMEEDVKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRH 859
Query: 187 CILDVSGNAIKRLQV-AQLFPIAIFIKPKSVESIMEM----------NKRMTEEQAKKTY 333
CILDVSGNAI+RLQ A + PI+IFIKP S + I+E+ ++ M+ E+A+ Y
Sbjct: 860 CILDVSGNAIRRLQSNANIQPISIFIKPSSAQQILELDSQLATNRQDDRAMSGEEAQAQY 919
Query: 334 ERALKMEQEFAEYFTAVVTG-DTPEEIYSKVKAVIAAESGPSVWVPR 471
R ++EQ F + FT ++ + ++ SKV ++I+ ES +WVPR
Sbjct: 920 SRCHRIEQTFGDLFTQEISNVHSANDVLSKVYSIISRESQTPIWVPR 966
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 89.0 bits (211), Expect = 4e-18
Identities = 45/154 (29%), Positives = 84/154 (54%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
TTRP R EVDG+ Y+FV + EQM DIQN+ ++E G + +++YGT + ++R + + GK
Sbjct: 468 TTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEESMYGTKLETIRNIHKSGKI 526
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFA 366
ILDV A+K L+ A+ P +FI +++ + + + +K + + Q F
Sbjct: 527 AILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----PDGSLEKLLNESDVLRQAFG 581
Query: 367 EYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVP 468
F ++T ++ ++++ ++ W+P
Sbjct: 582 HLFDFIITNSDIDDTIAQLERLVEKLPAYPQWLP 615
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical protein
F17E5.1a protein.
Length = 961
Score = 89.0 bits (211), Expect = 4e-18
Identities = 45/154 (29%), Positives = 84/154 (54%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
TTRP R EVDG+ Y+FV + EQM DIQN+ ++E G + +++YGT + ++R + + GK
Sbjct: 809 TTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEESMYGTKLETIRNIHKSGKI 867
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFA 366
ILDV A+K L+ A+ P +FI +++ + + + +K + + Q F
Sbjct: 868 AILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----PDGSLEKLLNESDVLRQAFG 922
Query: 367 EYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVP 468
F ++T ++ ++++ ++ W+P
Sbjct: 923 HLFDFIITNSDIDDTIAQLERLVEKLPAYPQWLP 956
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 89.0 bits (211), Expect = 4e-18
Identities = 45/154 (29%), Positives = 84/154 (54%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
TTRP R EVDG+ Y+FV + EQM DIQN+ ++E G + +++YGT + ++R + + GK
Sbjct: 468 TTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEESMYGTKLETIRNIHKSGKI 526
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFA 366
ILDV A+K L+ A+ P +FI +++ + + + +K + + Q F
Sbjct: 527 AILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----PDGSLEKLLNESDVLRQAFG 581
Query: 367 EYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVP 468
F ++T ++ ++++ ++ W+P
Sbjct: 582 HLFDFIITNSDIDDTIAQLERLVEKLPAYPQWLP 615
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 89.0 bits (211), Expect = 4e-18
Identities = 45/154 (29%), Positives = 84/154 (54%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
TTRP R EVDG+ Y+FV + EQM DIQN+ ++E G + +++YGT + ++R + + GK
Sbjct: 809 TTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEESMYGTKLETIRNIHKSGKI 867
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFA 366
ILDV A+K L+ A+ P +FI +++ + + + +K + + Q F
Sbjct: 868 AILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----PDGSLEKLLNESDVLRQAFG 922
Query: 367 EYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVP 468
F ++T ++ ++++ ++ W+P
Sbjct: 923 HLFDFIITNSDIDDTIAQLERLVEKLPAYPQWLP 956
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 72.5 bits (170), Expect(2) = 3e-14
Identities = 37/87 (42%), Positives = 57/87 (65%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
T+RP+R E DG +Y+F SR +MER I+ +E G++ DNLYGT++ SVR+ +EKG
Sbjct: 378 TSRPQRPNESDGVNYYFT-SRSEMERMIERKEMLEYGEFRDNLYGTALKSVRKASEKGT- 435
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKP 267
+L AI+ ++ + PI IF++P
Sbjct: 436 VLLTPHPLAIENIRTWEFAPIVIFVQP 462
Score = 23.8 bits (49), Expect(2) = 3e-14
Identities = 8/59 (13%), Positives = 29/59 (49%)
Frame = +1
Query: 298 KRMTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVPRR 474
+ ++ + ++ + + +MEQ++ Y A++ + +++ +I + W+P +
Sbjct: 502 RAFSDVEIRQIIDNSAQMEQKYRGYCDAIIRNVDLDTTMNELTGLIYQLESKATWMPMK 560
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 71.7 bits (168), Expect = 7e-13
Identities = 38/160 (23%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 WTTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGK 183
+T+R ++ E +G YHFV S+++ D ++ F+E G+Y YGT+ V V E+GK
Sbjct: 504 YTSRTPKEGEFNGVHYHFV-SKQKFHEDAKSGKFVEFGEYQKFWYGTAKKDVVNVIERGK 562
Query: 184 HCILDVSGNAIKRLQVAQLFPIAIFIKPKSV-----ESIMEMNKRMTEEQAKKTYERALK 348
C++ + ++ ++ + P IFI S+ + +E + +++ K ++
Sbjct: 563 TCVMTLKAESLGAIRSPDIQPYIIFIAAPSLYILRRQREVEGTFGVKDDELKAILTQSKS 622
Query: 349 MEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVP 468
+EQ++ F ++ E+ + ++K ++ + +WVP
Sbjct: 623 IEQKYGHLFDGIIVNIDFEKSFRELKQILMKVNTEPMWVP 662
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 66.9 bits (156), Expect = 2e-11
Identities = 31/96 (32%), Positives = 54/96 (56%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
T+R +R EV+GR+Y FV +E++ + I+ +E G+ + LYGTS SVR G+
Sbjct: 318 TSRAQRPGEVEGREYQFVR-KEEIYQKIREGGMVEWGELDSQLYGTSADSVRNEIRSGRM 376
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEM 294
C+LD + ++ L A+ P + + P +E ++
Sbjct: 377 CVLDAAPQSVNYLYNAEFMPFVVHVVPPPIEEFTQL 412
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 64.9 bits (151), Expect = 8e-11
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
TTR R E G+ Y+F +E+M+ I+N+ F+E ++ N YGTS +V E+ GK
Sbjct: 48 TTRQPRAGEEHGKHYYFT-EKEKMQEMIKNNEFLEFATFSGNTYGTSKKTVLEIENSGKI 106
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRM---TEEQAKKTYERALKMEQ 357
C+LD+ ++ ++ + L I I+ S++ + E + TEE K + A +
Sbjct: 107 CVLDIELQGVRNIKNSHLDARYILIRAPSIKLLEERLRARGTETEESLSKRLQHASEDLV 166
Query: 358 EFAE---YFTAVVTGDTPEEIYSK 420
E + F V+ D E Y +
Sbjct: 167 EIEKNPTLFDKVIVNDDLERAYKE 190
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 64.9 bits (151), Expect = 8e-11
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Frame = +1
Query: 7 TTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 186
TTR R E G+ Y+F +E+M+ I+N+ F+E ++ N YGTS +V E+ GK
Sbjct: 59 TTRQPRAGEEHGKHYYFT-EKEKMQEMIKNNEFLEFATFSGNTYGTSKKTVLEIENSGKI 117
Query: 187 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRM---TEEQAKKTYERALKMEQ 357
C+LD+ ++ ++ + L I I+ S++ + E + TEE K + A +
Sbjct: 118 CVLDIELQGVRNIKNSHLDARYILIRAPSIKLLEERLRARGTETEESLSKRLQHASEDLV 177
Query: 358 EFAE---YFTAVVTGDTPEEIYSK 420
E + F V+ D E Y +
Sbjct: 178 EIEKNPTLFDKVIVNDDLERAYKE 201
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 64.1 bits (149), Expect = 1e-10
Identities = 42/152 (27%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Frame = +1
Query: 61 ASREQMERDIQNHLFIEAGQYNDNLYG----TSVASVREVAEKGKHCILDVSGNAIKRLQ 228
AS +++ +++ + I++ Q ND++Y S A + ++ +G HC+L V +AI RL+
Sbjct: 880 ASLDEVSALLKDKVLIDSKQ-NDDVYDLYHVVSTAHIMDITAQGLHCVLQVDQSAIDRLK 938
Query: 229 VAQLFPIAIFIKPKSVESIMEMN-----KRMTEEQAKKTYERALKMEQEFAEYFTAVVTG 393
++FPI + I+ KSV+ + ++N ++++ ++AK+ E+ LK+E++ T VV
Sbjct: 939 RCRMFPILVKIRFKSVKQLKDVNEHICGEKISSKEAKQLIEKDLKIEKDLDGSVTLVVPS 998
Query: 394 DTPEEIYS-----KVKAVIAAESGPSVWVPRR 474
++K +I E VWV R+
Sbjct: 999 HNNVSFMMTHAVLQLKKIIEDEQKKIVWVQRK 1030
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 148 VASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEE--QA 321
++SV V KHC+LD+S +++RLQ+AQ PI +F+ I E+ K+ +
Sbjct: 598 LSSVDHVIASMKHCVLDISIESVERLQLAQYAPIVVFLDVDGRSKIREIRKKCNAPHLSS 657
Query: 322 KKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVPRREP 480
+K E ++++ + +A + + ++ +I +W+P P
Sbjct: 658 RKLAENGNQIKKHHSHLLSATIDATHETGWFDALRELIGHLQQRRLWMPEFPP 710
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 148 VASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEE--QA 321
++SV V KHC+LD+S +++RLQ+AQ PI +F+ I E+ K+ +
Sbjct: 598 LSSVDHVIASMKHCVLDISIESVERLQLAQYAPIVVFLDVDGRSKIREIRKKCNAPHLSS 657
Query: 322 KKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAESGPSVWVPRREP 480
+K E ++++ + +A + + ++ +I +W+P P
Sbjct: 658 RKLAENGNQIKKHHSHLLSATIDATHETGWFDALRELIGHLQQRRLWMPEFPP 710
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 4 WTTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGT 144
+TTRP R+ EVDG Y FV S + + + + +E G Y +LYGT
Sbjct: 234 YTTRPPREGEVDGEHYRFV-SVDDFNKLLDSGDLLENGTYQGHLYGT 279
>Z50028-2|CAA90337.1| 158|Caenorhabditis elegans Hypothetical
protein F46F6.4b protein.
Length = 158
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 19 RRDYEVDGRDYHFVASREQMERDIQNHLFIEA 114
R D E DGR+ HF + R IQ LFIEA
Sbjct: 122 RHDEEEDGRNKHFRTPSPESLRYIQVTLFIEA 153
>DQ365984-1|ABD14369.1| 161|Caenorhabditis elegans F46F6.3 protein
protein.
Length = 161
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 19 RRDYEVDGRDYHFVASREQMERDIQNHLFIEA 114
R D E DGR+ HF + R IQ LFIEA
Sbjct: 125 RHDEEEDGRNKHFRTPSPESLRYIQVTLFIEA 156
>Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical
protein T23G7.4 protein.
Length = 884
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 222 SLDCVTADVQNAMLALLGDFSHGCHGRS----VQIVVVLAGLDEQVILYVAL 79
+++C+ V NA+ ALL FS S QIV+ L GL+E + Y L
Sbjct: 776 AIECLQQTVSNALDALLLHFSRLNQDTSPLIVTQIVIDLTGLEEALSTYATL 827
>Z54236-3|CAA90985.1| 196|Caenorhabditis elegans Hypothetical
protein C27B7.2 protein.
Length = 196
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 336 FISFLRLFFCHSLVHFHYRLYTL-WFDKY 253
++SF R+ L+ F YR+ L WFD Y
Sbjct: 122 YVSFTRIIMNPRLLRFDYRMQNLSWFDGY 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,966,197
Number of Sequences: 27780
Number of extensions: 296361
Number of successful extensions: 1015
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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