Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C21
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ...    32   0.47 
Z81490-1|CAB04014.1|  510|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF330595-1|AAK00353.1|  510|Caenorhabditis elegans SMU-1 protein.      30   1.9  
U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
            protein Y80D3A.2 protein.
          Length = 1467

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
 Frame = +2

Query: 227  KRWNEILKRGKPVTIYSKVCSLHFTQADY--NITTM-GQWKTLNKDAVPSQNLPKLNP-- 391
            ++WNE  K G+P+ I   +   HF    Y  N+  M   ++    + + SQ L  LNP  
Sbjct: 1344 RKWNERSKDGEPMEIQDTLHMTHFVHEFYMSNLPAMRDAYEQAMNEYMESQRL--LNPPI 1401

Query: 392  DGSVMVIRKSRTVKYKET----KKHEMNGEKSERI 484
            D + M +      K++E     KK EM+ +K   I
Sbjct: 1402 DETQMDVETEHEKKHREAMERKKKQEMDDKKEADI 1436


>Z81490-1|CAB04014.1|  510|Caenorhabditis elegans Hypothetical
           protein CC4.3 protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -3

Query: 651 GRXGGGCVRSWGGEGSLARDVTYCILHERLISCSVHGS-----GKSG 526
           G   G C++   G  S   DV Y      +ISCS  GS     GKSG
Sbjct: 335 GMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSG 381


>AF330595-1|AAK00353.1|  510|Caenorhabditis elegans SMU-1 protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -3

Query: 651 GRXGGGCVRSWGGEGSLARDVTYCILHERLISCSVHGS-----GKSG 526
           G   G C++   G  S   DV Y      +ISCS  GS     GKSG
Sbjct: 335 GMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSG 381


>U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical
           protein F55F8.2b protein.
          Length = 579

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 416 KSRTVKYKETKKHEMNGEKSERIWGITPQNHGQTNMNPDLPLPCTEQDINLSCKMQYVT 592
           ++  + Y ET+  EM+G   E    +      Q  +  +L LP    D + S K +Y+T
Sbjct: 444 RAADLDYDETRHREMDGLNLEVDTMVQKSRQLQAQLRTELSLPLPRVDGSDSMKTKYIT 502


>U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical
           protein F55F8.2a protein.
          Length = 746

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 416 KSRTVKYKETKKHEMNGEKSERIWGITPQNHGQTNMNPDLPLPCTEQDINLSCKMQYVT 592
           ++  + Y ET+  EM+G   E    +      Q  +  +L LP    D + S K +Y+T
Sbjct: 611 RAADLDYDETRHREMDGLNLEVDTMVQKSRQLQAQLRTELSLPLPRVDGSDSMKTKYIT 669


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,367
Number of Sequences: 27780
Number of extensions: 389272
Number of successful extensions: 1000
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)