Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C19
(820 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 54 1e-09
BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein... 54 1e-09
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 51 9e-09
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 35 0.41
BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein. 35 0.41
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 35 0.41
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 35 0.41
X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein. 31 6.6
BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261... 31 6.6
BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3... 31 6.6
BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein. 31 6.6
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ... 31 6.6
AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4 ... 31 6.6
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b... 31 6.6
AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase 4a... 31 6.6
AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein. 31 6.6
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 54.0 bits (124), Expect(2) = 1e-09
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +1
Query: 352 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 525
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 526 SVAQPEESVFRECLLERCSVE---ENKIISGLETSXENMRGFAMFLARDLY 669
P+ FR+ LL+RC E +++ G E + + F +FL +LY
Sbjct: 229 LTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLG-ELY 278
Score = 29.1 bits (62), Expect(2) = 1e-09
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 112 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 252
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 400
Score = 54.0 bits (124), Expect(2) = 1e-09
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +1
Query: 352 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 525
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 90 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 149
Query: 526 SVAQPEESVFRECLLERCSVE---ENKIISGLETSXENMRGFAMFLARDLY 669
P+ FR+ LL+RC E +++ G E + + F +FL +LY
Sbjct: 150 LTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLG-ELY 199
Score = 29.1 bits (62), Expect(2) = 1e-09
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 112 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 252
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 47 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 93
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 50.8 bits (116), Expect(2) = 9e-09
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Frame = +1
Query: 352 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 525
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 526 SVAQPEESVFRECLLERCSVE---ENKIISGLETSXENMRGFAMFLARDLY 669
P+ F + LL+RC E +++ G E + + F +FL +LY
Sbjct: 229 LTISPQSGNFCQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLG-ELY 278
Score = 29.1 bits (62), Expect(2) = 9e-09
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 112 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 252
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 WSAPKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 138
W P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 362 WETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 WSAPKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 138
W P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 51 WETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 97
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 WSAPKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 138
W P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 362 WETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 WSAPKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 138
W P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 362 WETPQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein.
Length = 1358
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 415 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 254
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261
protein.
Length = 495
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 415 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 254
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3
protein.
Length = 1370
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 415 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 254
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein.
Length = 495
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 415 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 254
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 1036
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 142 YPANYTSQALPAYNTEPAPYRPSRP 216
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 570
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 142 YPANYTSQALPAYNTEPAPYRPSRP 216
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 142 YPANYTSQALPAYNTEPAPYRPSRP 216
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase
4alpha protein.
Length = 570
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 142 YPANYTSQALPAYNTEPAPYRPSRP 216
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein.
Length = 1380
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 415 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 254
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 407 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 462
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,104,577
Number of Sequences: 237096
Number of extensions: 2615066
Number of successful extensions: 9731
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9707
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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