Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C18
(881 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 167 9e-44
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 167 9e-44
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 167 9e-44
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 24 1.6
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 23 3.7
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 23 3.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 3.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 4.9
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 22 8.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 8.6
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 167 bits (407), Expect = 9e-44
Identities = 81/166 (48%), Positives = 106/166 (63%), Gaps = 4/166 (2%)
Frame = +3
Query: 120 ICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQADF 299
+ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD
Sbjct: 23 VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82
Query: 300 VPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPINNLDQLK 467
V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPINN+ L+
Sbjct: 83 VAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLR 142
Query: 468 GLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKAL 605
GLKSCHTGV RNVGYKIP+T L V ++D S +ENEL+AL
Sbjct: 143 GLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRAL 188
Score = 120 bits (289), Expect = 2e-29
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +1
Query: 607 STFFTKSCIVGKWSPDPKTNSAWKXQYNKLCSMCEHPERCDYPDEFSGYVGALKCLAHNN 786
S+ F+K C+VG WSPDP N K Y+ +C++CE PE CDYPD +SGY GAL+CLAHN
Sbjct: 189 SSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNG 248
Query: 787 GQVAFTKVIFTRKXFGLPVG 846
G++A+TKVI+ ++ FGLPVG
Sbjct: 249 GEIAWTKVIYVKRFFGLPVG 268
Score = 45.2 bits (102), Expect = 8e-07
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 234 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 413
DC + + +CL +++ AD V + A K N ++ + Y +
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473
Query: 414 AVIVIHKDLPINNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 566
AV V+ K IN L+ L+ KSCH+G + G+ P+ L ++ + N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 736 DEFSGYVGALKCLAHNNGQVAF 801
+ + G GAL CL G VAF
Sbjct: 571 ETYRGGKGALSCLLDGKGDVAF 592
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 167 bits (407), Expect = 9e-44
Identities = 81/166 (48%), Positives = 106/166 (63%), Gaps = 4/166 (2%)
Frame = +3
Query: 120 ICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQADF 299
+ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD
Sbjct: 23 VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82
Query: 300 VPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPINNLDQLK 467
V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPINN+ L+
Sbjct: 83 VAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLR 142
Query: 468 GLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKAL 605
GLKSCHTGV RNVGYKIP+T L V ++D S +ENEL+AL
Sbjct: 143 GLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRAL 188
Score = 120 bits (289), Expect = 2e-29
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +1
Query: 607 STFFTKSCIVGKWSPDPKTNSAWKXQYNKLCSMCEHPERCDYPDEFSGYVGALKCLAHNN 786
S+ F+K C+VG WSPDP N K Y+ +C++CE PE CDYPD +SGY GAL+CLAHN
Sbjct: 189 SSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNG 248
Query: 787 GQVAFTKVIFTRKXFGLPVG 846
G++A+TKVI+ ++ FGLPVG
Sbjct: 249 GEIAWTKVIYVKRFFGLPVG 268
Score = 45.2 bits (102), Expect = 8e-07
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 234 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 413
DC + + +CL +++ AD V + A K N ++ + Y +
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473
Query: 414 AVIVIHKDLPINNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 566
AV V+ K IN L+ L+ KSCH+G + G+ P+ L ++ + N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 736 DEFSGYVGALKCLAHNNGQVAF 801
+ + G GAL CL G VAF
Sbjct: 571 ETYRGGKGALSCLLDGKGDVAF 592
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 167 bits (407), Expect = 9e-44
Identities = 81/166 (48%), Positives = 106/166 (63%), Gaps = 4/166 (2%)
Frame = +3
Query: 120 ICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQADF 299
+ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD
Sbjct: 23 VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82
Query: 300 VPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPINNLDQLK 467
V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPINN+ L+
Sbjct: 83 VAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLR 142
Query: 468 GLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELKAL 605
GLKSCHTGV RNVGYKIP+T L V ++D S +ENEL+AL
Sbjct: 143 GLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRAL 188
Score = 120 bits (289), Expect = 2e-29
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +1
Query: 607 STFFTKSCIVGKWSPDPKTNSAWKXQYNKLCSMCEHPERCDYPDEFSGYVGALKCLAHNN 786
S+ F+K C+VG WSPDP N K Y+ +C++CE PE CDYPD +SGY GAL+CLAHN
Sbjct: 189 SSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNG 248
Query: 787 GQVAFTKVIFTRKXFGLPVG 846
G++A+TKVI+ ++ FGLPVG
Sbjct: 249 GEIAWTKVIYVKRFFGLPVG 268
Score = 45.2 bits (102), Expect = 8e-07
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 234 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 413
DC + + +CL +++ AD V + A K N ++ + Y +
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473
Query: 414 AVIVIHKDLPINNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 566
AV V+ K IN L+ L+ KSCH+G + G+ P+ L ++ + N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 736 DEFSGYVGALKCLAHNNGQVAF 801
+ + G GAL CL G VAF
Sbjct: 571 ETYRGGKGALSCLLDGKGDVAF 592
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 93 LKYFILITLICACVNA 140
+K F++I+ IC CV A
Sbjct: 1 MKTFVIISAICVCVGA 16
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 23.0 bits (47), Expect = 3.7
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = +3
Query: 93 LKYFILITLICACVNA---------AKTTYKICVPSQHLKACQDMVDIPTKSKVTLD 236
+K ++I+ IC CV+A T +C+ + + Q ++D + K+ +D
Sbjct: 1 MKTIVIISAICVCVSAMTLDELKSGLHTVQSVCM--KEIGTAQQIIDDINEGKINMD 55
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 93 LKYFILITLICACVNA 140
+K F++I IC CV A
Sbjct: 1 MKTFVIIFAICVCVGA 16
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 59 LTELVGCLDNGSKIFHFDNPD 121
LT L+GCL G +I D D
Sbjct: 211 LTGLIGCLTLGRRILRLDAID 231
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -2
Query: 124 QIRVIKMKYFRAIVKATDKL 65
++ ++K + FR+ +KA+DKL
Sbjct: 653 KLMMLKHREFRSSIKASDKL 672
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 93 LKYFILITLICACVNA 140
+K ++I+ IC CV A
Sbjct: 1 MKTIVIISAICVCVGA 16
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 771 SRSQQRTSRLHQSHIH 818
++S QR + LH+ H+H
Sbjct: 85 AQSWQRLTSLHELHVH 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,727
Number of Sequences: 438
Number of extensions: 5215
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -