Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C17
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB032986-1|BAA86474.1|  351|Homo sapiens KIAA1160 protein protein.    252   2e-66
BC019849-1|AAH19849.1|  285|Homo sapiens ISY1 splicing factor ho...   249   1e-65
BC004442-1|AAH04442.1|  285|Homo sapiens ISY1 splicing factor ho...   249   1e-65
BC007409-1|AAH07409.1|  307|Homo sapiens ISY1 protein protein.        241   3e-63

>AB032986-1|BAA86474.1|  351|Homo sapiens KIAA1160 protein protein.
          Length = 351

 Score =  252 bits (616), Expect = 2e-66
 Identities = 119/158 (75%), Positives = 137/158 (86%)
 Frame = +1

Query: 211 MS*TMARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAK 390
           +S TMARNAEKAMT LAR+R AQ++E G  +ERRP+LASEC +LP+AEKWR QI+ EI+K
Sbjct: 17  LSDTMARNAEKAMTALARFRQAQLEE-GKVKERRPFLASECTELPKAEKWRRQIIGEISK 75

Query: 391 KVAQIQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVP 570
           KVAQIQNAGLGEFRIRDLNDEINKL+REK HWEV+IK LGGPD+ +VGPKMLD +GKEVP
Sbjct: 76  KVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVP 135

Query: 571 GNRGYKYFGAAXDLPGVRELFEQEXXXXXXXTRADLMR 684
           GNRGYKYFGAA DLPGVRELFE+E       TRA+LM+
Sbjct: 136 GNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMK 173


>BC019849-1|AAH19849.1|  285|Homo sapiens ISY1 splicing factor
           homolog (S. cerevisiae) protein.
          Length = 285

 Score =  249 bits (609), Expect = 1e-65
 Identities = 117/154 (75%), Positives = 134/154 (87%)
 Frame = +1

Query: 223 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 402
           MARNAEKAMT LAR+R AQ++E G  +ERRP+LASEC +LP+AEKWR QI+ EI+KKVAQ
Sbjct: 1   MARNAEKAMTALARFRQAQLEE-GKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 59

Query: 403 IQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRG 582
           IQNAGLGEFRIRDLNDEINKL+REK HWEV+IK LGGPD+ +VGPKMLD +GKEVPGNRG
Sbjct: 60  IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRG 119

Query: 583 YKYFGAAXDLPGVRELFEQEXXXXXXXTRADLMR 684
           YKYFGAA DLPGVRELFE+E       TRA+LM+
Sbjct: 120 YKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMK 153


>BC004442-1|AAH04442.1|  285|Homo sapiens ISY1 splicing factor
           homolog (S. cerevisiae) protein.
          Length = 285

 Score =  249 bits (609), Expect = 1e-65
 Identities = 117/154 (75%), Positives = 134/154 (87%)
 Frame = +1

Query: 223 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 402
           MARNAEKAMT LAR+R AQ++E G  +ERRP+LASEC +LP+AEKWR QI+ EI+KKVAQ
Sbjct: 1   MARNAEKAMTALARFRQAQLEE-GKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 59

Query: 403 IQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRG 582
           IQNAGLGEFRIRDLNDEINKL+REK HWEV+IK LGGPD+ +VGPKMLD +GKEVPGNRG
Sbjct: 60  IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRG 119

Query: 583 YKYFGAAXDLPGVRELFEQEXXXXXXXTRADLMR 684
           YKYFGAA DLPGVRELFE+E       TRA+LM+
Sbjct: 120 YKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMK 153


>BC007409-1|AAH07409.1|  307|Homo sapiens ISY1 protein protein.
          Length = 307

 Score =  241 bits (589), Expect = 3e-63
 Identities = 112/140 (80%), Positives = 127/140 (90%)
 Frame = +1

Query: 223 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 402
           MARNAEKAMT LAR+R AQ++E G  +ERRP+LASEC +LP+AEKWR QI+ EI+KKVAQ
Sbjct: 1   MARNAEKAMTALARFRQAQLEE-GKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 59

Query: 403 IQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRG 582
           IQNAGLGEFRIRDLNDEINKL+REK HWEV+IK LGGPD+ +VGPKMLD +GKEVPGNRG
Sbjct: 60  IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRG 119

Query: 583 YKYFGAAXDLPGVRELFEQE 642
           YKYFGAA DLPGVRELFE+E
Sbjct: 120 YKYFGAAKDLPGVRELFEKE 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,645,251
Number of Sequences: 237096
Number of extensions: 2131842
Number of successful extensions: 4524
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4519
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)