Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C16
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   1.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.7  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   8.3  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 441 SCFMFPGYLWKTWEGG 488
           +CF+  G LW +WE G
Sbjct: 379 ACFLTRGDLWISWEEG 394


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 578 PHELAHSKLLRFPILYM*SSQLYQRSGSIFFMD 676
           P    +S LLR+P      +  +Q S SIF  D
Sbjct: 377 PRRSIYSSLLRYPRSIFRQTDDHQNSPSIFISD 409


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 11  PHPTRGRSARPYSRPRPTR 67
           PHP   R A+P ++P   R
Sbjct: 251 PHPRLRREAKPEAKPGNNR 269


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 393 YLTSSCPSTCGPT 355
           Y+T++ PS CG T
Sbjct: 13  YITAAFPSACGKT 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,941
Number of Sequences: 438
Number of extensions: 5049
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)