Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C15
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 287 6e-78
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 276 2e-74
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 276 2e-74
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 211 5e-55
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 118 6e-27
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 109 4e-24
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 89 3e-18
12_02_1184 + 26785739-26786113 65 6e-11
12_02_1183 - 26764883-26765174,26765559-26765677 62 4e-10
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 40 0.003
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 31 1.5
02_01_0240 - 1593186-1593323,1593380-1593406 31 1.5
12_01_0250 - 1852619-1854124,1855224-1856153,1856293-1856409,185... 28 8.1
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 287 bits (705), Expect = 6e-78
Identities = 140/240 (58%), Positives = 177/240 (73%), Gaps = 3/240 (1%)
Frame = +3
Query: 132 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 311
+ L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 6 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
Query: 312 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKXFGMV 488
W+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQK G++
Sbjct: 66 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLGIL 125
Query: 489 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGISLX 668
I +G+A+ YV++GMYG S++G G +LII+QLF AG QKGYGLG GISL
Sbjct: 126 IAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLF 185
Query: 669 XATNICETIVWKAFSPXTVXTGRGHXIRG--VL*XHCSICRXNXXDKXRXLREAFYRQXL 842
ATNICE I+WKAFSP T+ +GRG G + H I R DK R LREAFYRQ L
Sbjct: 186 IATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITR---TDKVRALREAFYRQNL 242
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 276 bits (676), Expect = 2e-74
Identities = 140/250 (56%), Positives = 177/250 (70%), Gaps = 13/250 (5%)
Frame = +3
Query: 132 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 311
+ L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 6 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
Query: 312 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKXFGMV 488
W+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQK G++
Sbjct: 66 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLGIL 125
Query: 489 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGISLX 668
I +G+A+ YV++GMYG S++G G +LII+QLF AG QKGYGLG GISL
Sbjct: 126 IAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLF 185
Query: 669 XATNIC----------ETIVWKAFSPXTVXTGRGHXIRG--VL*XHCSICRXNXXDKXRX 812
ATNIC E I+WKAFSP T+ +GRG G + H I R DK R
Sbjct: 186 IATNICLLLVNLLLHSENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITR---TDKVRA 242
Query: 813 LREAFYRQXL 842
LREAFYRQ L
Sbjct: 243 LREAFYRQNL 252
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 276 bits (676), Expect = 2e-74
Identities = 140/250 (56%), Positives = 177/250 (70%), Gaps = 13/250 (5%)
Frame = +3
Query: 132 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 311
+ L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 6 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
Query: 312 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKXFGMV 488
W+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQK G++
Sbjct: 66 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLGIL 125
Query: 489 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGISLX 668
I +G+A+ YV++GMYG S++G G +LII+QLF AG QKGYGLG GISL
Sbjct: 126 IAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLF 185
Query: 669 XATNIC----------ETIVWKAFSPXTVXTGRGHXIRG--VL*XHCSICRXNXXDKXRX 812
ATNIC E I+WKAFSP T+ +GRG G + H I R DK R
Sbjct: 186 IATNICLLLVNLLLHSENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITR---TDKVRA 242
Query: 813 LREAFYRQXL 842
LREAFYRQ L
Sbjct: 243 LREAFYRQNL 252
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 211 bits (516), Expect = 5e-55
Identities = 104/240 (43%), Positives = 149/240 (62%), Gaps = 6/240 (2%)
Frame = +3
Query: 132 KFLEVIKPFCSILPEIAKPE-RKIQFREKVLWTAITLFIFLVCCQIPLFGI----MSSDS 296
+ L++++PF +LPE+ +P+ R++ FR K+ TA LF FL C Q+PL+G+ +
Sbjct: 10 RLLDLVRPFMPLLPEVREPDGRRVPFRRKLACTAAALFAFLACSQLPLYGLHRAAAAGGG 69
Query: 297 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQK 473
ADPFYW+R ILASNRGT+MELGI+P+VT+G ++QLL G+ ++ + P DRAL + AQK
Sbjct: 70 ADPFYWVRAILASNRGTVMELGITPVVTAGTLVQLLVGSNLVRADSSNPDDRALLSAAQK 129
Query: 474 XFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGX 653
+VIT G+A YV++G YG +GAG +L+++QL + G QKGYG G
Sbjct: 130 LLSIVITAGEATAYVLSGAYGSVGVLGAGNAVLVVLQLVLGGMVAIFLDELLQKGYGFGS 189
Query: 654 GISLXXATNICETIVWKAFSPXTVXTGRGHXIRGVL*XHCSICRXNXXDKXRXLREAFYR 833
GISL A N CE +V +A SP T+ GRG G + + K +REAF+R
Sbjct: 190 GISLFTAANTCEGVVTRALSPATMDRGRGAEFVGAVTAAAHLLATRAR-KLSAVREAFFR 248
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 118 bits (284), Expect = 6e-27
Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 5/232 (2%)
Frame = +3
Query: 162 SILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA---DPFYWIRVILA 332
+++PE+ P++ I R+K +TAI LFIF+ Q+ L+GI DP +W+ +ILA
Sbjct: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
Query: 333 SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKXFGMVITVGQAI 509
S+R TL+ GI I+ +++++ KII + + P+ L N AQ+ G+++ + A+
Sbjct: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
Query: 510 VYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGISLXXATNICE 689
+ + + + + LI++Q+ + +KGYGL GISL ATNIC
Sbjct: 132 NFYVRSQHFTVNTV------LIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICV 185
Query: 690 TIVWKAFSPXTV-XTGRGHXIRGVL*XHCSICRXNXXDKXRXLREAFYRQXL 842
I+WKAFSP +V + G + + DK + +AFYRQ L
Sbjct: 186 NILWKAFSPMSVMYPEQSPEFEGAVIAWVHLL-MTRTDKLSAMSKAFYRQNL 236
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 109 bits (261), Expect = 4e-24
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Frame = +3
Query: 198 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 365
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 366 SPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKXFGMVITVGQAIVYVMTGMYGEPS 545
P++ S + +++ + +I P N A+K + + + A+ V++ G +
Sbjct: 75 IPLLLSEMAVRIFSA--LIITRWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSA--GVAA 130
Query: 546 EIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGISLXXATNICETIVWKAFS 713
E+G L+++ QLF+ G QKGYGL G+SL A N C I WKAF+
Sbjct: 131 ELGTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSLFAAANCCACIFWKAFT 186
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 89.4 bits (212), Expect = 3e-18
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Frame = +3
Query: 144 VIKPFCSILPEIAKP-ERKIQFREKVLWTAI-TLFIFLVCCQIPLFGIMSSDSADPFYWI 317
+++P + P + + E + FR +V TA +L + L +PL+ DP +W
Sbjct: 19 LLRPLAVLGPRMQRRREAAVPFRGQVRNTAAASLLLLLSLSHVPLYAGAGDADPDPLFWA 78
Query: 318 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKXFGMVITV 497
R +LA+ RGT+MELG++P+VTS ++++LLA ++ D+ A + V
Sbjct: 79 RPLLAAPRGTVMELGVAPVVTSWVVVRLLAA--LLFDSDSSTTVASCELLARCLAYVTNA 136
Query: 498 GQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLG--XGISLXX 671
+ ++ + + G GAG L+++QLF G + GYG+ SL
Sbjct: 137 SRLVIGIAAAL-GMCGSGGAGNAALVVLQLFAGGVVVVLADLLHETGYGVEGVSAASLLI 195
Query: 672 ATNICETIVWKAFSPXTV-XTGRGHXIRG 755
ATN CE V FSP + G G G
Sbjct: 196 ATNACERAVSHLFSPVKLRLAGAGPEFEG 224
>12_02_1184 + 26785739-26786113
Length = 124
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +3
Query: 198 IQFREKVLWTAITLFIFLVCCQIPLFGIMS---SDSADPFYWIRVILASNRGTLMELGIS 368
+ FR KVL+TA++L +FLV ++ L+G+ + DP YW+ + AS R T+M LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 369 PIVTSGLIMQLLAGAKIIEVGD 434
P++ S +++ L KII V D
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHD 114
>12_02_1183 - 26764883-26765174,26765559-26765677
Length = 136
Score = 62.5 bits (145), Expect = 4e-10
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +3
Query: 198 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 365
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 48 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 107
Query: 366 SPIVTSGLIMQLLA 407
P++ S + +++ +
Sbjct: 108 IPLLLSEMAVRIFS 121
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 468 QKXFGMVITVGQ--AIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGY 641
++ F M I + AIV + + G I L+ + QL G +KGY
Sbjct: 9 RRLFAMQIAIVSPVAIVLYASAIAGGTPFITTAA-LVFVFQLIAGGLIAIYLDDLLRKGY 67
Query: 642 GLGXGISLXXATNICETIVWKAFS 713
G G+SL A N C I WKA +
Sbjct: 68 GFLSGLSLFSAANCCACIFWKALN 91
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -3
Query: 593 HKQLYDNEEAHSGTNFTGFTIHSSHYINNSLTNSNHHTKXFLCT--IKQSPVFRSVT-NF 423
H +L D +EA SG G H H ++ HH L T I+ + SV +F
Sbjct: 112 HSRLIDLKEASSGFELMGMHRHRQHRVDFMEWAPGHHVGVALITMPIRAGARYCSVVGDF 171
Query: 422 NDFSTSK 402
N +ST++
Sbjct: 172 NQWSTTE 178
>02_01_0240 - 1593186-1593323,1593380-1593406
Length = 54
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 254 MLPDSLIWYNVIRQCRSLLLDPCNSCIKQRDI 349
++ D L+W + R C+S ++P C R I
Sbjct: 15 LISDGLLWLAIARCCKSTCMEPIQGCFLSRQI 46
>12_01_0250 -
1852619-1854124,1855224-1856153,1856293-1856409,
1856777-1857157
Length = 977
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -1
Query: 223 HNTFSRN*ILRSGFAISGNILQNGLITSKNFISILIYCDLTILTKI 86
HN F N L +GF + + KNF+ I + +L + K+
Sbjct: 99 HNFFKLNPYLSTGFVTINRAIMEAMEDEKNFLEIKVKSNLCSILKL 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,960,627
Number of Sequences: 37544
Number of extensions: 399290
Number of successful extensions: 897
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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