Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C15
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p pro...   398   e-111
AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA...   398   e-111
AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha ...   398   e-111
BT021428-1|AAX33576.1|  317|Drosophila melanogaster GM07807p pro...    33   0.65 
AE014298-2020|AAN09582.1|  317|Drosophila melanogaster CG32599-P...    33   0.65 
DQ507278-1|ABG24573.1|  829|Drosophila melanogaster roadkill iso...    31   2.6  
BT021321-1|AAX33469.1|  829|Drosophila melanogaster RE09049p pro...    31   2.6  
AE014297-1781|AAF55008.2|  829|Drosophila melanogaster CG9924-PE...    31   2.6  
AF174134-2|AAF88147.1|  293|Drosophila melanogaster unknown prot...    29   6.0  

>AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p
           protein.
          Length = 476

 Score =  398 bits (979), Expect = e-111
 Identities = 199/240 (82%), Positives = 203/240 (84%)
 Frame = +3

Query: 123 MEIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 302
           M IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 303 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKXFG 482
           PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQK FG
Sbjct: 61  PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 483 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGIS 662
           MVIT+GQAIVYVMTGMYG+PSEIGAGVCLLIIIQLF AG          QKGYGLG GIS
Sbjct: 121 MVITIGQAIVYVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGIS 180

Query: 663 LXXATNICETIVWKAFSPXTVXTGRGHXIRGVL*XHCSICRXNXXDKXRXLREAFYRQXL 842
           L  ATNICETIVWKAFSP TV TGRG    G +     +      DK R LREAFYRQ L
Sbjct: 181 LFIATNICETIVWKAFSPTTVTTGRGTEFEGAVIALFHL-MATRNDKVRALREAFYRQNL 239


>AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA
           protein.
          Length = 476

 Score =  398 bits (979), Expect = e-111
 Identities = 199/240 (82%), Positives = 203/240 (84%)
 Frame = +3

Query: 123 MEIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 302
           M IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 303 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKXFG 482
           PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQK FG
Sbjct: 61  PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 483 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGIS 662
           MVIT+GQAIVYVMTGMYG+PSEIGAGVCLLIIIQLF AG          QKGYGLG GIS
Sbjct: 121 MVITIGQAIVYVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGIS 180

Query: 663 LXXATNICETIVWKAFSPXTVXTGRGHXIRGVL*XHCSICRXNXXDKXRXLREAFYRQXL 842
           L  ATNICETIVWKAFSP TV TGRG    G +     +      DK R LREAFYRQ L
Sbjct: 181 LFIATNICETIVWKAFSPTTVTTGRGTEFEGAVIALFHL-MATRNDKVRALREAFYRQNL 239


>AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha
           protein.
          Length = 476

 Score =  398 bits (979), Expect = e-111
 Identities = 199/240 (82%), Positives = 203/240 (84%)
 Frame = +3

Query: 123 MEIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 302
           M IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 303 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKXFG 482
           PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQK FG
Sbjct: 61  PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 483 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGXXXXXXXXXXQKGYGLGXGIS 662
           MVIT+GQAIVYVMTGMYG+PSEIGAGVCLLIIIQLF AG          QKGYGLG GIS
Sbjct: 121 MVITIGQAIVYVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGIS 180

Query: 663 LXXATNICETIVWKAFSPXTVXTGRGHXIRGVL*XHCSICRXNXXDKXRXLREAFYRQXL 842
           L  ATNICETIVWKAFSP TV TGRG    G +     +      DK R LREAFYRQ L
Sbjct: 181 LFIATNICETIVWKAFSPTTVTTGRGTEFEGAVIALFHL-MATRNDKVRALREAFYRQNL 239


>BT021428-1|AAX33576.1|  317|Drosophila melanogaster GM07807p
           protein.
          Length = 317

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 620 IEQXHXKTGHKQLYDNEEAHSGTNFTGFTIHSSHYINNSLTN-SNHHTK 477
           +E+ H +  H +   +   HSGT+ TG    S HY+N  L N    H K
Sbjct: 150 LEEKHAR--HAKKAQSHHGHSGTDSTGSASSSLHYVNELLPNGGGEHRK 196


>AE014298-2020|AAN09582.1|  317|Drosophila melanogaster CG32599-PA
           protein.
          Length = 317

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 620 IEQXHXKTGHKQLYDNEEAHSGTNFTGFTIHSSHYINNSLTN-SNHHTK 477
           +E+ H +  H +   +   HSGT+ TG    S HY+N  L N    H K
Sbjct: 150 LEEKHAR--HAKKAQSHHGHSGTDSTGSASSSLHYVNELLPNGGGEHRK 196


>DQ507278-1|ABG24573.1|  829|Drosophila melanogaster roadkill
           isoform E protein.
          Length = 829

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 701 PYNGFTDVXSXXQRDTXTQSISFLEQFIEQXHXKTGH--KQLYDNEEAHSGTNFTGFTIH 528
           P +  +   S     + + S S+ +  ++Q H    H  +Q   +   HS ++ +  +  
Sbjct: 322 PLSASSSSASASPSASTSSSSSYQQSSVQQQHYNCAHPAQQQQHHHHHHSSSSSSSSSSS 381

Query: 527 SSHYINNSLTNSNHHTK 477
           SSH+ +NS ++SN + +
Sbjct: 382 SSHHHHNSSSSSNSNNQ 398


>BT021321-1|AAX33469.1|  829|Drosophila melanogaster RE09049p
           protein.
          Length = 829

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 701 PYNGFTDVXSXXQRDTXTQSISFLEQFIEQXHXKTGH--KQLYDNEEAHSGTNFTGFTIH 528
           P +  +   S     + + S S+ +  ++Q H    H  +Q   +   HS ++ +  +  
Sbjct: 322 PLSASSSSASASPSASTSSSSSYQQSSVQQQHYNCAHPAQQQQHHHHHHSSSSSSSSSSS 381

Query: 527 SSHYINNSLTNSNHHTK 477
           SSH+ +NS ++SN + +
Sbjct: 382 SSHHHHNSSSSSNSNNQ 398


>AE014297-1781|AAF55008.2|  829|Drosophila melanogaster CG9924-PE,
           isoform E protein.
          Length = 829

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 701 PYNGFTDVXSXXQRDTXTQSISFLEQFIEQXHXKTGH--KQLYDNEEAHSGTNFTGFTIH 528
           P +  +   S     + + S S+ +  ++Q H    H  +Q   +   HS ++ +  +  
Sbjct: 322 PLSASSSSASASPSASTSSSSSYQQSSVQQQHYNCAHPAQQQQHHHHHHSSSSSSSSSSS 381

Query: 527 SSHYINNSLTNSNHHTK 477
           SSH+ +NS ++SN + +
Sbjct: 382 SSHHHHNSSSSSNSNNQ 398


>AF174134-2|AAF88147.1|  293|Drosophila melanogaster unknown protein
           protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -3

Query: 575 NEEAHSGTNFTGFTIHSSHYINNSLTN-SNHHTK 477
           +   HSGT+ TG    S HY+N  L N    H K
Sbjct: 139 SHHGHSGTDSTGSASSSLHYVNELLPNGGGEHRK 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,225,874
Number of Sequences: 53049
Number of extensions: 713397
Number of successful extensions: 1799
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)