BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C14
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein. 32 3.1
D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein. 32 3.1
AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or... 32 3.1
AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or... 32 3.1
AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or... 32 3.1
AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or... 32 3.1
AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein. 32 3.1
AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein. 32 3.1
AB209068-1|BAD92305.1| 636|Homo sapiens ash1 (absent, small, or... 32 3.1
AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein. 32 3.1
BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IM... 31 7.1
AB208807-1|BAD92044.1| 248|Homo sapiens D site of albumin promo... 31 7.1
AK074528-1|BAC11041.1| 145|Homo sapiens protein ( Homo sapiens ... 30 9.4
>M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein.
Length = 638
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -2
Query: 248 LRTVIATNTNTKCNHATNTSFINYYKLGTDNNRCVALNSVIMRNEQEHFKALLKSK 81
LRT+ + +HA++TS + L DNNRC+ L S+I ++ + +SK
Sbjct: 318 LRTLYEMELSQMQSHASDTSVV----LSMDNNRCLDLGSIIAEVRTQYEEIAQRSK 369
>D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.
Length = 1805
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 383 PAGQQRGIERGWECAPPADTQHTVHATTTPRVASMSTRFYRTR 255
P GQQ G + WE PP +T+ + A+ + R A T F R +
Sbjct: 179 PTGQQGGTRKLWE-IPPYETKGVMRASFSSREADNHTAFIRIK 220
>AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2964
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260
>AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2969
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260
>AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2964
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260
>AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2969
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260
>AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein.
Length = 638
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -2
Query: 248 LRTVIATNTNTKCNHATNTSFINYYKLGTDNNRCVALNSVIMRNEQEHFKALLKSK 81
LRT+ + +HA++TS + L DNNRC+ L S+I ++ + +SK
Sbjct: 318 LRTLYEMELSQMQSHASDTSVV----LSMDNNRCLDLGSIIAEVRAQYEEIAQRSK 369
>AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.
Length = 2969
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260
>AB209068-1|BAD92305.1| 636|Homo sapiens ash1 (absent, small, or
homeotic)-like variant protein.
Length = 636
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 509 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 551
>AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.
Length = 1349
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 315 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 187
C + S +HV + P +S + + + KHKHK + R+ +L
Sbjct: 1222 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1264
>BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for
IMAGE:4824581) protein.
Length = 603
Score = 30.7 bits (66), Expect = 7.1
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -3
Query: 589 SGAPCNSGRSRRETSTVRANDHAPRSVPRPARTRAVPIFAEDQSGAHRPRAQRRG*SRAH 410
S +P + R S +A DH+ P AR R+ QSG RPRA + +AH
Sbjct: 448 SRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPNKQSGYSRPRASSK--EKAH 505
>AB208807-1|BAD92044.1| 248|Homo sapiens D site of albumin promoter
(albumin D-box) binding protein variant protein.
Length = 248
Score = 30.7 bits (66), Expect = 7.1
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 384 PQPRSCGAQCARDHP----RRCALGLCAPD*SSAKMGTARVRAGRGTLLGAWSFAR 539
P P SCG+ R P R ALG + + A G RV GRG G + R
Sbjct: 162 PGPGSCGSASPRSSPGHAPARAALGTASGHRAGAAKGAGRVLTGRGLDSGGGAVRR 217
>AK074528-1|BAC11041.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ90047 fis, clone HEMBA1002316. ).
Length = 145
Score = 30.3 bits (65), Expect = 9.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 324 PAHCPRDHDAESRQHVDAVLPHSSPLANCHRNKHKH 217
P P H + H +P S+PL N HR H H
Sbjct: 62 PVSTPSSHPHQ-HHHPTYTIPPSTPLPNLHRRPHSH 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,107,838
Number of Sequences: 237096
Number of extensions: 2070710
Number of successful extensions: 5785
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5782
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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