Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C10
(906 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D32053-1|BAA22084.1| 597|Homo sapiens Lysyl tRNA Synthetase pro... 179 1e-44
D31890-1|BAA06688.1| 601|Homo sapiens KIAA0070 protein. 179 1e-44
BC004132-1|AAH04132.1| 597|Homo sapiens lysyl-tRNA synthetase p... 179 1e-44
AF285758-1|AAG30114.1| 625|Homo sapiens lysyl-tRNA synthetase p... 179 1e-44
AK126584-1|BAC86604.1| 423|Homo sapiens protein ( Homo sapiens ... 34 0.62
>D32053-1|BAA22084.1| 597|Homo sapiens Lysyl tRNA Synthetase
protein.
Length = 597
Score = 179 bits (436), Expect = 1e-44
Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 5/148 (3%)
Frame = +1
Query: 211 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 387
+EE + PN+YYK+RS A+ LK NG ED PYPHKF+V ISL +FI+KY +L GD L +
Sbjct: 67 EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 123
Query: 388 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 567
+TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F +KLRRGDIIG
Sbjct: 124 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 183
Query: 568 CVGHPGKTKKGELSIIPKNIN----CLH 639
G+PGKTKKGELSIIP I CLH
Sbjct: 184 VQGNPGKTKKGELSIIPYEITLLSPCLH 211
Score = 33.9 bits (74), Expect = 0.82
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +3
Query: 615 PEKYKLLAPCLHMLPHXISVSKTKKPALXKXYLXXFXE**GXEKSFXQXLKSXXYVXXIX 794
P + LL+PCLHMLPH K K+ + YL +K F K Y+
Sbjct: 200 PYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK-FIIRSKIITYIRSF- 257
Query: 795 XTXXGFLKVGXPXFXFWXPGG 857
GFL++ P PGG
Sbjct: 258 LDELGFLEIETPMMNI-IPGG 277
>D31890-1|BAA06688.1| 601|Homo sapiens KIAA0070 protein.
Length = 601
Score = 179 bits (436), Expect = 1e-44
Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 5/148 (3%)
Frame = +1
Query: 211 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 387
+EE + PN+YYK+RS A+ LK NG ED PYPHKF+V ISL +FI+KY +L GD L +
Sbjct: 71 EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 127
Query: 388 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 567
+TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F +KLRRGDIIG
Sbjct: 128 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 187
Query: 568 CVGHPGKTKKGELSIIPKNIN----CLH 639
G+PGKTKKGELSIIP I CLH
Sbjct: 188 VQGNPGKTKKGELSIIPYEITLLSPCLH 215
Score = 33.9 bits (74), Expect = 0.82
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +3
Query: 615 PEKYKLLAPCLHMLPHXISVSKTKKPALXKXYLXXFXE**GXEKSFXQXLKSXXYVXXIX 794
P + LL+PCLHMLPH K K+ + YL +K F K Y+
Sbjct: 204 PYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK-FIIRSKIITYIRSF- 261
Query: 795 XTXXGFLKVGXPXFXFWXPGG 857
GFL++ P PGG
Sbjct: 262 LDELGFLEIETPMMNI-IPGG 281
>BC004132-1|AAH04132.1| 597|Homo sapiens lysyl-tRNA synthetase
protein.
Length = 597
Score = 179 bits (436), Expect = 1e-44
Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 5/148 (3%)
Frame = +1
Query: 211 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 387
+EE + PN+YYK+RS A+ LK NG ED PYPHKF+V ISL +FI+KY +L GD L +
Sbjct: 67 EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 123
Query: 388 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 567
+TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F +KLRRGDIIG
Sbjct: 124 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 183
Query: 568 CVGHPGKTKKGELSIIPKNIN----CLH 639
G+PGKTKKGELSIIP I CLH
Sbjct: 184 VQGNPGKTKKGELSIIPYEITLLSPCLH 211
Score = 33.9 bits (74), Expect = 0.82
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +3
Query: 615 PEKYKLLAPCLHMLPHXISVSKTKKPALXKXYLXXFXE**GXEKSFXQXLKSXXYVXXIX 794
P + LL+PCLHMLPH K K+ + YL +K F K Y+
Sbjct: 200 PYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK-FIIRSKIITYIRSF- 257
Query: 795 XTXXGFLKVGXPXFXFWXPGG 857
GFL++ P PGG
Sbjct: 258 LDELGFLEIETPMMNI-IPGG 277
>AF285758-1|AAG30114.1| 625|Homo sapiens lysyl-tRNA synthetase
protein.
Length = 625
Score = 179 bits (436), Expect = 1e-44
Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 5/148 (3%)
Frame = +1
Query: 211 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKFNVSISLEEFIEKYQNLNNGDVLEN 387
+EE + PN+YYK+RS A+ LK NG ED PYPHKF+V ISL +FI+KY +L GD L +
Sbjct: 95 EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKFHVDISLTDFIQKYSHLQPGDHLTD 151
Query: 388 VTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETEDKFFKDTDKLRRGDIIG 567
+TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y++E++F +KLRRGDIIG
Sbjct: 152 ITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIG 211
Query: 568 CVGHPGKTKKGELSIIPKNIN----CLH 639
G+PGKTKKGELSIIP I CLH
Sbjct: 212 VQGNPGKTKKGELSIIPYEITLLSPCLH 239
Score = 33.9 bits (74), Expect = 0.82
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +3
Query: 615 PEKYKLLAPCLHMLPHXISVSKTKKPALXKXYLXXFXE**GXEKSFXQXLKSXXYVXXIX 794
P + LL+PCLHMLPH K K+ + YL +K F K Y+
Sbjct: 228 PYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK-FIIRSKIITYIRSF- 285
Query: 795 XTXXGFLKVGXPXFXFWXPGG 857
GFL++ P PGG
Sbjct: 286 LDELGFLEIETPMMNI-IPGG 305
>AK126584-1|BAC86604.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ44621 fis, clone BRACE2016896, highly similar
to Lysyl-tRNA synthetase (EC 6.1.1.6). ).
Length = 423
Score = 34.3 bits (75), Expect = 0.62
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 211 QEEEISPNEYYKLRSGAVAALKNGLKEDHPYPHKFNVSISLEEFIEK 351
+EE + PN+YYK+RS A+ L GLK+ + + + L +F+ +
Sbjct: 67 EEESVDPNQYYKIRSQAI-HLHFGLKDKETRYRQRYLDLILNDFVRQ 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,056,842
Number of Sequences: 237096
Number of extensions: 1594027
Number of successful extensions: 6543
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6535
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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