Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C09
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 50 1e-06
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 46 4e-05
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 45 7e-05
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 45 7e-05
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 45 7e-05
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 45 7e-05
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 40 0.002
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 40 0.002
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 40 0.003
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 40 0.003
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 40 0.003
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 37 0.019
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 32 0.42
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 32 0.42
AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical ... 32 0.42
AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical ... 29 5.1
AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 268
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 269 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF 385
D P+ A ++K ++ +LPE +LT EL+ F
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDF 273
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 268
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 269 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF 385
D P+ A ++K ++ +LPE +LT EL+ F
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDF 502
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 268
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 269 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF 385
D P+ A ++K ++ +LPE +LT EL+ F
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDF 273
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 268
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 269 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF 385
D P+ A ++K ++ +LPE +LT EL+ F
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDF 502
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Frame = +2
Query: 74 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 253
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 774 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 830
Query: 254 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAI 403
++ ++RG + W DV V ++LK F+ +LPE +LT +L+ F A I
Sbjct: 831 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRI 890
Query: 404 A-EPQREATMTNLIXXLPNCXHNPLAWLMKXXXXFXSXXQVN 526
+ R + NL+ LP ++ L +L+ VN
Sbjct: 891 STHHNRLHKLRNLLRKLPRPHYDTLRFLIVHLSEITKHSDVN 932
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Frame = +2
Query: 74 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 253
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 652 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 708
Query: 254 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAI 403
++ ++RG + W DV V ++LK F+ +LPE +LT +L+ F A I
Sbjct: 709 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRI 768
Query: 404 A-EPQREATMTNLIXXLPNCXHNPLAWLMKXXXXFXSXXQVN 526
+ R + NL+ LP ++ L +L+ VN
Sbjct: 769 STHHNRLHKLRNLLRKLPRPHYDTLRFLIVHLSEITKHSDVN 810
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 268
+ G+PL +SV D LP R +ID+++ +GL ++ IYR P K + +L +
Sbjct: 52 VLGLPLTESVSADPSLDGIPLPSFFRYAIDFVEENGLCTEGIYRLSPPKSRLDELERR-A 110
Query: 269 DRGPTFPYHWDVPVACAMLKAFISELPESILTQE 370
+ G + D A ++K F+ ++PE ++ E
Sbjct: 111 NCGEKMIFA-DAHDAAGLIKRFLRQIPEPVVPIE 143
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 45.6 bits (103), Expect = 4e-05
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Frame = +2
Query: 56 EEIFTLGVALPIFGVPLQQ--SVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEP 229
E + + P+FGVPL + S+++ R V+ D+L+ +G+ + I+R
Sbjct: 227 ERMIATALPRPVFGVPLDEHLSIQKERISG------VLTKCCDFLRQNGMNERGIFRVSG 280
Query: 230 DKIKFQQLRKLFTDRGPTFP----YHWDVPVACAMLKAFISELPESILTQELHGQFEQAT 397
+ K +++R D G Y+ D + LKA++ ELP+ + L + +A
Sbjct: 281 NASKIKRIRAAL-DAGQFDADEKHYNNDPHAVASTLKAYLRELPDPLTMDSLQSDWVEAI 339
Query: 398 AIAEPQREATMTNLIXXLPNCXHNPLAWLMK 490
+ +R + + + + L +LMK
Sbjct: 340 NLEGEERFSAIDRCLKKMTRGHRQNLIYLMK 370
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 256
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 486 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 541
Query: 257 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 427
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 542 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 598
Query: 428 MTNLIXXLPNC 460
+L+ + +C
Sbjct: 599 NRHLVLKIIDC 609
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 256
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 257 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 427
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 740 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 796
Query: 428 MTNLIXXLPNC 460
+L+ + +C
Sbjct: 797 NRHLVLKIIDC 807
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 256
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 752 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 807
Query: 257 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 427
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 808 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 864
Query: 428 MTNLIXXLPNC 460
+L+ + +C
Sbjct: 865 NRHLVLKIIDC 875
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Frame = +2
Query: 89 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 256
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 257 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 427
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 740 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 796
Query: 428 MTNLIXXLPNC 460
+L+ + +C
Sbjct: 797 NRHLVLKIIDC 807
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Frame = +2
Query: 92 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 256
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 48 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 103
Query: 257 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 424
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 104 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 163
Query: 425 TMTNLIXXLPNCXHNPLAWLMKXXXXFXSXXQVN 526
+ + LP + L ++K +VN
Sbjct: 164 AVKEFVKLLPRENYILLKTVIKFLTRVAENSKVN 197
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Frame = +2
Query: 92 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 256
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 247 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 302
Query: 257 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 424
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 303 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 362
Query: 425 TMTNLIXXLPNCXHNPLAWLMKXXXXFXSXXQVN 526
+ + LP + L ++K +VN
Sbjct: 363 AVKEFVKLLPRENYILLKTVIKFLTRVAENSKVN 396
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 149 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 319
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 320 MLKAFISELPESILTQELHGQFEQATAIAE 409
LK+F S LPES++ H +++Q +++
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSD 1250
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 149 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 319
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 320 MLKAFISELPESILTQELHGQFEQATAIAE 409
LK+F S LPES++ H +++Q +++
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSD 1250
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +2
Query: 137 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 292
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 66 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 124
Query: 293 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAE 409
W+ + +K F+ LPE ++T ELH F A + +
Sbjct: 125 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGD 163
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +2
Query: 137 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 292
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 293 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAE 409
W+ + +K F+ LPE ++T ELH F A + +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGD 503
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +2
Query: 137 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 292
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 293 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAE 409
W+ + +K F+ LPE ++T ELH F A + +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGD 503
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 152 PLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYH-WDVPVACAMLK 328
P + +D+L+ G ++ I+R P + F++L K D+G +H ++ V ++LK
Sbjct: 264 PQPIMTIVDHLRMDGFDAEGIFRKSPKQSTFKEL-KCELDKGVVPDFHKYNTHVLASILK 322
Query: 329 AFISELPESILTQELHGQFE 388
++ +P IL L G +E
Sbjct: 323 EYLRSIPGKIL---LSGNYE 339
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGP-TFPYHWDVPVACAML 325
+P + ++ + + HG+ + I+R E + ++ + +G P + V C M+
Sbjct: 65 VPKFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMV 124
Query: 326 KAFISELPESILTQE 370
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 325
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 326 KAFISELPESILTQE 370
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4b protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 325
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 326 KAFISELPESILTQE 370
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical
protein 2RSSE.1 protein.
Length = 343
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/93 (22%), Positives = 45/93 (48%)
Frame = +2
Query: 92 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTD 271
FGVP+ ++ HD +P + + + G KDI+R ++ + ++L ++
Sbjct: 28 FGVPINEAF----AHD---IPATLLMLLLKVNKDGPAKKDIWRAPGNQAQVRKLSQVMQH 80
Query: 272 RGPTFPYHWDVPVACAMLKAFISELPESILTQE 370
++ V A +++K F+S+LP I ++
Sbjct: 81 GRLVNIENFTVYTAASVIKKFLSKLPNGIFGRD 113
>AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical
protein Y41D4B.17 protein.
Length = 400
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -2
Query: 231 SGSVRYISFDFNPCACK*SMLSRTTSGRPVSSWQRERSTDCCSGTPNIGSATPNVKISSK 52
+GS Y+ P A S ++ T++GR VS Q S SG N S ++ IS+
Sbjct: 37 NGSKLYLCSSDGPIAL--SKITVTSNGRTVSLDQLLVS----SGFLNGWSVNSDLTISTS 90
Query: 51 GTPDVTVDCIFVNFLS 4
TPDVT + + F+S
Sbjct: 91 NTPDVTNNLGGIIFIS 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,699,802
Number of Sequences: 27780
Number of extensions: 249667
Number of successful extensions: 668
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -