Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C05
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 273 2e-74
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 155 8e-39
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 148 1e-36
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 122 9e-29
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 82 1e-16
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 76 7e-15
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 74 2e-14
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 52 1e-07
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 35 0.013
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 28 1.9
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.5
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 5.9
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.9
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 5.9
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.8
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 273 bits (669), Expect = 2e-74
Identities = 125/141 (88%), Positives = 129/141 (91%)
Frame = +3
Query: 261 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 440
P IVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY 91
Query: 441 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 620
NELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGI
Sbjct: 92 NELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGI 151
Query: 621 VLDSGDGVSHTVPHLRGIRTP 683
VLDSGDGV+HTVP G P
Sbjct: 152 VLDSGDGVTHTVPIYEGYALP 172
Score = 109 bits (263), Expect = 4e-25
Identities = 51/66 (77%), Positives = 55/66 (83%)
Frame = +1
Query: 658 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREXVRDXXXXLCYVXLXF 837
PIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAERE VRD LCYV L F
Sbjct: 164 PIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDF 223
Query: 838 XQXMAT 855
Q + T
Sbjct: 224 EQELQT 229
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 170 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 155 bits (376), Expect = 8e-39
Identities = 72/142 (50%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +3
Query: 261 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 440
P VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + +
Sbjct: 36 PTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYS 95
Query: 441 NE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 617
++ L PEEHP+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTG
Sbjct: 96 DQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTG 155
Query: 618 IVLDSGDGVSHTVPHLRGIRTP 683
IVL+ GDG++H+VP G P
Sbjct: 156 IVLECGDGLTHSVPIYDGFSIP 177
Score = 59.3 bits (137), Expect = 7e-10
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +1
Query: 658 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREXVRDXXXXLCYVXLXF 837
PIY+G+++P AI + ++ GRD+TDYL L + G+ ++AE+E VR+ CYV F
Sbjct: 169 PIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDF 228
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 188 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 148 bits (358), Expect = 1e-36
Identities = 68/135 (50%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +3
Query: 261 PRIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 434
P IVGRP R + + KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +T
Sbjct: 30 PSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYT 89
Query: 435 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 614
F+ +L++ P +LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++
Sbjct: 90 FFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSS 149
Query: 615 GIVLDSGDGVSHTVP 659
G+V+DSGDGV+H VP
Sbjct: 150 GVVVDSGDGVTHIVP 164
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1
Query: 658 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREXVRDXXXXLCYV 825
P+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR+ LCYV
Sbjct: 164 PVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYV 219
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 176 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 122 bits (293), Expect = 9e-29
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 9/127 (7%)
Frame = +3
Query: 318 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 494
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 495 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 650
LNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192
Query: 651 TVPHLRG 671
+P G
Sbjct: 193 IIPVAEG 199
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 188 LVVDNGSGMCKAGFAGDDAPRAVFPS 265
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 658 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREXVRDXXXXLC 819
P+ EGY + +I + LAGRD+T ++ +L +R ++ E +++ +C
Sbjct: 195 PVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAERIKEECCYVC 248
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 81.8 bits (193), Expect = 1e-16
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Frame = +3
Query: 306 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 482
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 483 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTV 656
TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVI 180
Query: 657 PHLRGIR 677
P L G R
Sbjct: 181 PVLNGER 187
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 188 LVVDNGSGMCKAGFAGDDAPRAVF 259
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 75.8 bits (178), Expect = 7e-15
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +3
Query: 360 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 539
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 540 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 635
E+ PA Y+A Q + +ASG+ T ++D G
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIG 154
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 173 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 277
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 74.1 bits (174), Expect = 2e-14
Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +3
Query: 279 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 452
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 453 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 632
V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDI 156
Query: 633 GDGVSHTVPHLRGI 674
G + P + G+
Sbjct: 157 GSDNASVTPVVDGL 170
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 173 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG-KAPPSGRD 298
EE+ +LV+D GS + G+AG+++P + PS G ++ +GR+
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN 50
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 52.0 bits (119), Expect = 1e-07
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 375 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 542
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 543 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPHLRG 671
P +A + ++ LYA G G+V+D G + P L G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 658 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREXVRDXXXXLCYVXLXF 837
P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E V + +CYV F
Sbjct: 172 PVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKESVCYVSQNF 229
Query: 838 XQXM 849
+ M
Sbjct: 230 KEDM 233
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 435 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 578
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 725 VRSRPAKSRRRMAWGSAYPS*MGHGVGDTVAGVQHDTGGTTGR 597
VR R ++ +R G Y S G G GDTV GG GR
Sbjct: 118 VRGR-GQNVQRGGRGGRYGSSGGRGAGDTVVSRSSGAGGARGR 159
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 556 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPI-YEGYALPHAILRLDLAGRDLTD 729
PP P + T PV PV+ A P P P A H + D A + D
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAPAAEHVVALYDYAAQAAGD 425
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 321 SPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEP 202
+P VP P RP P R A AL +P+P
Sbjct: 538 APEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQP 577
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -2
Query: 351 FCSVPHLLHKSPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEPLSTTNAATSS 172
F S+P + K P+ P P + + A +S+P P P+ + ++TSS
Sbjct: 193 FSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINP--RAPQTRRESISSTSS 250
Query: 171 SH 166
H
Sbjct: 251 IH 252
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 477 LLTEAPLNPKANREKMTQIMFETFN 551
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 342 VPHLLHKSPSVPYRPSRPDGGA 277
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 215 TYRSHCLLPTRQLLRRTS*ISEI 147
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 371 FEGQDTSFALCLISYIRVLLSHTDHHA 291
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,655,073
Number of Sequences: 5004
Number of extensions: 81680
Number of successful extensions: 268
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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