Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C03
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0072 - 15721866-15723563                                         30   2.7  
01_04_0070 - 15704794-15706491                                         30   2.7  
01_01_0917 + 7238721-7239078,7239590-7239957                           29   4.6  
02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936...    29   6.1  
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852...    28   8.1  

>01_04_0072 - 15721866-15723563
          Length = 565

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 632 NNYHSVFGEGGDTSTPPLLDLSEFPSL-TARGAGDQAPTTAPPXXGSKP 775
           N+ HSV    G   TP + D +   S  T   AG   PT+ P   GSKP
Sbjct: 5   NDSHSVTIPDGMFPTPHMEDAAAGASSDTKPAAGTNTPTSTPKDDGSKP 53


>01_04_0070 - 15704794-15706491
          Length = 565

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 632 NNYHSVFGEGGDTSTPPLLDLSEFPSL-TARGAGDQAPTTAPPXXGSKP 775
           N+ HSV    G   TP + D +   S  T   AG   PT+ P   GSKP
Sbjct: 5   NDSHSVTIPDGMFPTPHMEDAAAGASSDTKPAAGTNTPTSTPKDDGSKP 53


>01_01_0917 + 7238721-7239078,7239590-7239957
          Length = 241

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 738 AWSPAPLAVSDGNSLRSRSGGVDVSPPSPKTE 643
           AW+  P ++  G+S   R  G+D+ P  P T+
Sbjct: 166 AWTQPPPSLRTGSSTMRRCDGIDLPPGDPTTD 197


>02_05_0190 -
           26592452-26592693,26592911-26593004,26593425-26593656,
           26594660-26595066
          Length = 324

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -1

Query: 756 GGAVVGAWSPAPLAVSDGNSLRSRSGG---VDVSPPSP 652
           GGA   A SP   + S G   R+RSGG      SPP P
Sbjct: 30  GGASTSATSPVAASSSSGGRPRTRSGGRLLRATSPPPP 67


>02_03_0074 +
           14781763-14784191,14784888-14784978,14785180-14785230,
           14785882-14785947,14786509-14786610
          Length = 912

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 666 THQHHHFWT*ANFHH*QQEARVTKHPLQHHH 758
           +H HHH  + +   H    A     P+ HHH
Sbjct: 168 SHHHHHHHSGSRKRHSMPPAYTAAEPVSHHH 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,237,779
Number of Sequences: 37544
Number of extensions: 392720
Number of successful extensions: 1143
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)